LOCUS VTR94804.1 713 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2: HlyD_2 protein. ACCESSION LR593886-4105 PROTEIN_ID VTR94804.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_29100" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.379 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=1e-52 ; Q/S_length_ratio=1.161" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.373 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=1e-49 ; Q/S_length_ratio=1.682" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.372 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=8e-49 ; Q/S_length_ratio=1.273" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0D7F3|L0D7F3_SINAD ; ALN/Q_length_ratio=0.626 ; DESCRIPTION=RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0100 PE=4 SV=1 ; EVALUE=3e-48 ; Q/S_length_ratio=1.473" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0D7L2|L0D7L2_SINAD ; ALN/Q_length_ratio=0.415 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0185 PE=4 SV=1 ; EVALUE=2e-47 ; Q/S_length_ratio=1.423" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DKD8|L0DKD8_SINAD ; ALN/Q_length_ratio=0.414 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4965 PE=4 SV=1 ; EVALUE=7e-47 ; Q/S_length_ratio=0.798" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.404 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=5e-45 ; Q/S_length_ratio=2.235" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.411 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=2e-43 ; Q/S_length_ratio=1.194" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DDR3|L0DDR3_SINAD ; ALN/Q_length_ratio=0.380 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1 ; EVALUE=9e-42 ; Q/S_length_ratio=0.647" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.349 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=1e-41 ; Q/S_length_ratio=1.479" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DJM8|L0DJM8_SINAD ; ALN/Q_length_ratio=0.352 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4894 PE=4 SV=1 ; EVALUE=6e-41 ; Q/S_length_ratio=1.617" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DQA3|L0DQA3_SINAD ; ALN/Q_length_ratio=0.376 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6979 PE=4 SV=1 ; EVALUE=9e-41 ; Q/S_length_ratio=1.602" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DA12|L0DA12_SINAD ; ALN/Q_length_ratio=0.439 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1318 PE=4 SV=1 ; EVALUE=1e-40 ; Q/S_length_ratio=0.985" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|A0A090KPX2|A0A090KPX2_9BACT ; ALN/Q_length_ratio=0.407 ; DESCRIPTION=Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1 ; EVALUE=2e-40 ; Q/S_length_ratio=0.615" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DFV7|L0DFV7_SINAD ; ALN/Q_length_ratio=0.365 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3442 PE=4 SV=1 ; EVALUE=3e-39 ; Q/S_length_ratio=0.581" /note="Pfam_scan:hit_1 (41..112); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:66; HMM_Length:71; EVALUE:1.3e-10; BITSCORE: 40.6" /note="Pfam_scan:hit_2 (133..186); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54; EVALUE:2.4e-12; BITSCORE: 46.0" /note="Pfam_scan:hit_3 (313..691); Pfam:PF12700.2:HlyD_2; Pfam_type:Family;HMM_aln_Length:324; HMM_Length:328; EVALUE:3.7e-29; BITSCORE: 101.9" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0055085" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MNHGPRRLPR IPSLSSTGPP IDADLLARFI STGDEVAFEL LVRRHAPMVL AVCRRVLADP 61 NDADDAFQAA FLVLARKAAS VARAEVLAGW LYRIAYRAAV RVRSDRLRRA THADASPDLL 121 PAPTTDPNAR ELERVLDEEV AKLPERHRVA FVLCCLEGKT GEEAGRLIGC PPGTVSSRLT 181 RARERLRERL TRRGFAPALI VTVLSACAES AAAVSALTAL IDSTVHAAPG FATRRPTAAL 241 TARPATIAEG VIRTMNATKL KTLALLFALG LLAVGGVFAA PNASPEEEPN QPPKAKVGGA 301 QKAPAAPVVR VVQPQRGGLD RVSRNAGHAE PLQQADLFAT IAGTLKRVNV NLGDHVKRGQ 361 LLAEIDAPAL VLEERRAQID IEQAKSLLHE AEARLIAAKA EINTAKLTVK QRETEEAGAK 421 ATHVLWRKKH DQIVKISGAG TSDASDAELH LRTAETQLEG ATVAIESAKS DVAVKQSKLL 481 QTEANVGNAK TTIEAANLAL QKARLALEQA KIEAPFDGVV TRQNASAGDH VRPTERDTDR 541 ALFTLTRVDR VRFVTAVPES EVAHATVGAS AVVTFASRPG VRINEKISRI GFAIEKNGRM 601 RVEVDVPAAT NDIRPGMFGE VTLTLGKGPA DALRVPLSAI TEGPKERPGG SHGVYVYRDG 661 KARLTFVKVS QHNEKEVEIA SGLTADDLVV VDPKGLKSQP EVAVEVERPA PPK //