LOCUS VTR94005.1 203 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_26594 PE=4 SV=1: Sigma70_r4_2 protein. ACCESSION LR593886-3306 PROTEIN_ID VTR94005.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_37090" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|A3ZY49|A3ZY49_9PLAN ; ALN/Q_length_ratio=0.980 ; DESCRIPTION=Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_26594 PE=4 SV=1 ; EVALUE=2e-78 ; Q/S_length_ratio=0.985" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DGW7|L0DGW7_SINAD ; ALN/Q_length_ratio=0.985 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4435 PE=4 SV=1 ; EVALUE=6e-77 ; Q/S_length_ratio=0.944" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|A3ZSI4|A3ZSI4_9PLAN ; ALN/Q_length_ratio=0.842 ; DESCRIPTION=Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_14900 PE=4 SV=1 ; EVALUE=1e-14 ; Q/S_length_ratio=0.967" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|A3ZWH9|A3ZWH9_9PLAN ; ALN/Q_length_ratio=0.842 ; DESCRIPTION=Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_26329 PE=4 SV=1 ; EVALUE=1e-12 ; Q/S_length_ratio=1.005" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|A3ZX69|A3ZX69_9PLAN ; ALN/Q_length_ratio=0.803 ; DESCRIPTION=Uncharacterized protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_27758 PE=4 SV=1 ; EVALUE=7e-10 ; Q/S_length_ratio=1.010" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|F0SMW5|F0SMW5_PLABD ; ALN/Q_length_ratio=1.010 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_2367 PE=4 SV=1 ; EVALUE=6e-09 ; Q/S_length_ratio=0.971" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|M5T5F6|M5T5F6_9PLAN ; ALN/Q_length_ratio=0.764 ; DESCRIPTION=RNA polymerase sigma-70 domain protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_03146 PE=4 SV=1 ; EVALUE=6e-09 ; Q/S_length_ratio=1.173" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DID4|L0DID4_SINAD ; ALN/Q_length_ratio=0.640 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5005 PE=4 SV=1 ; EVALUE=3e-08 ; Q/S_length_ratio=1.015" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|G2SGV7|G2SGV7_RHOMR ; ALN/Q_length_ratio=0.443 ; DESCRIPTION=RNA polymerase sigma factor OS=Rhodothermus marinus SG0.5JP17-172 GN=Rhom172_2428 PE=3 SV=1 ; EVALUE=9e-08 ; Q/S_length_ratio=1.036" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|B5WV43|B5WV43_9BURK ; ALN/Q_length_ratio=0.778 ; DESCRIPTION=RNA polymerase sigma factor OS=Burkholderia sp. H160 GN=BH160DRAFT_6946 PE=3 SV=1 ; EVALUE=5e-07 ; Q/S_length_ratio=1.147" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|D0MF51|D0MF51_RHOM4 ; ALN/Q_length_ratio=0.443 ; DESCRIPTION=RNA polymerase sigma factor OS=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) GN=Rmar_2429 PE=3 SV=1 ; EVALUE=5e-07 ; Q/S_length_ratio=1.036" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|V7Z880|V7Z880_9XANT ; ALN/Q_length_ratio=0.320 ; DESCRIPTION=RNA polymerase, sigma-24 subunit, ECF subfamily OS=Xanthomonas hortorum pv. carotae str. M081 GN=fecI PE=4 SV=1 ; EVALUE=8e-07 ; Q/S_length_ratio=1.041" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|A0A038H412|A0A038H412_9BURK ; ALN/Q_length_ratio=0.778 ; DESCRIPTION=RNA polymerase sigma factor OS=Burkholderia sp. MP-1 GN=BG58_25220 PE=3 SV=1 ; EVALUE=3e-06 ; Q/S_length_ratio=1.147" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|H5XLD6|H5XLD6_9PSEU ; ALN/Q_length_ratio=0.473 ; DESCRIPTION=DNA-directed RNA polymerase specialized sigma subunit, sigma24 OS=Saccharomonospora cyanea NA-134 GN=SaccyDRAFT_5182 PE=4 SV=1 ; EVALUE=9e-06 ; Q/S_length_ratio=1.015" /note="Pfam_scan:hit_1 (135..188); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:51; HMM_Length:54; EVALUE:2e-13; BITSCORE: 49.5" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MDEEQTTAVV QRYLDELAGG APAEPVVRAL LDRAVRRLHQ LCATLLYRGY PRLTQPPLNV 61 QADEMLGAVA ERLLKALREA RPANVRQFFA LAGQHTRWEL NDLARRLDEQ PRAVELPDGT 121 FPAPTTSDSG LSPIGRRMIE AIDALPEDER EVFDLVRVQG LTQVEAAEVL GVVPKTVKRR 181 LDRGLRLLTE RLGDLRPGAP DSG //