LOCUS VTR93992.1 960 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4458 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-3293 PROTEIN_ID VTR93992.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_37220" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DHB1|L0DHB1_SINAD ; ALN/Q_length_ratio=1.012 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4458 PE=4 SV=1 ; EVALUE=1e-55 ; Q/S_length_ratio=0.986" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DIK4|L0DIK4_SINAD ; ALN/Q_length_ratio=1.020 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4459 PE=4 SV=1 ; EVALUE=3e-42 ; Q/S_length_ratio=0.981" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DKL4|L0DKL4_SINAD ; ALN/Q_length_ratio=0.740 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5058 PE=4 SV=1 ; EVALUE=2e-35 ; Q/S_length_ratio=1.001" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DQE6|L0DQE6_SINAD ; ALN/Q_length_ratio=0.906 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7079 PE=4 SV=1 ; EVALUE=2e-34 ; Q/S_length_ratio=1.007" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0DKD8|L0DKD8_SINAD ; ALN/Q_length_ratio=0.322 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4965 PE=4 SV=1 ; EVALUE=3e-28 ; Q/S_length_ratio=1.075" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DQ81|L0DQ81_SINAD ; ALN/Q_length_ratio=0.475 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7511 PE=4 SV=1 ; EVALUE=3e-27 ; Q/S_length_ratio=1.111" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.219 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=2e-25 ; Q/S_length_ratio=1.564" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DCW6|L0DCW6_SINAD ; ALN/Q_length_ratio=0.197 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2795 PE=4 SV=1 ; EVALUE=2e-25 ; Q/S_length_ratio=2.494" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DFV7|L0DFV7_SINAD ; ALN/Q_length_ratio=0.208 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3442 PE=4 SV=1 ; EVALUE=2e-25 ; Q/S_length_ratio=0.782" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DDR3|L0DDR3_SINAD ; ALN/Q_length_ratio=0.548 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1 ; EVALUE=4e-25 ; Q/S_length_ratio=0.871" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DGT0|L0DGT0_SINAD ; ALN/Q_length_ratio=0.255 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3827 PE=4 SV=1 ; EVALUE=4e-25 ; Q/S_length_ratio=1.558" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.227 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=1e-24 ; Q/S_length_ratio=1.928" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.281 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=2e-24 ; Q/S_length_ratio=1.714" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.280 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=3e-23 ; Q/S_length_ratio=3.009" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|A6C2K8|A6C2K8_9PLAN ; ALN/Q_length_ratio=0.444 ; DESCRIPTION=Probable regulatory protein blaR1 OS=Planctomyces maris DSM 8797 GN=PM8797T_09114 PE=4 SV=1 ; EVALUE=7e-23 ; Q/S_length_ratio=0.896" /note="Pfam_scan:hit_1 (72..143); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:68; HMM_Length:71; EVALUE:1.1e-11; BITSCORE: 44.1" /note="Pfam_scan:hit_2 (163..216); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:47; HMM_Length:54; EVALUE:4.7e-09; BITSCORE: 35.5" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MPKRCEKSGP LEAALCVLTR TTAGGFMAEK PRSTVIRQLR FVVASWKEDT RTDVDLLRRF 61 IQERDEQAFT TLVGRHSELV WGVCLRVLRN PADAEDALQA TFLRLTRDAK RIINKEALGG 121 WLFRVARDCS IDLQRAITRQ RRIEERVAEV APHSGGSAAS DLRVLLDDEL AQLSQSERAV 181 LVLCCLEGRT YADAALELGC STAAVHRRFV RAQTRLRRRF AQHGKTATKI LAAVLTGAAL 241 PAASAAPPTL LAQTVETGLA VARTGTLPTT RAGAFANAAP SAVANGTNRT GIAVALLAVS 301 VVLVGCAVAF MIPPELPQAP TPEAEATPLA SSTRAQTTVT GVVRGPKGEL VAGASVVALA 361 RRPFGPGERG LRDEVIATTQ TGTDGRFALN VFDDFDTWFT GRVVTVQASG PNFAPTTFPV 421 RLRPSPGEVE LKLAAASDLR GKLLDETGHA AAGARVEVVR IGDAVAEPVV GRTESASPPA 481 WPKAVVSSAD GTFVLPALGG AENVWVRVLD PRFALDVFRV GGTKPGAIGA FRLDRACSLT 541 VEVRAGDTDA VLPGARVTVI TDPVSAHPHF CATEHGVLGP RSIPADIDAV ADSRGRVRVN 601 LTPRDQVEVL VHPLAESGPY VGVRTRVEIA TASTDQRLVV RVPRGRWLTG TVTDECGKPL 661 GGTAVHWGRE SAALPEWKDD VLVGRDAITR TAPDGVFALP VLPGACSVRV YGPTPDFETA 721 SAKLPGTTHT TIFAHHIARI EVPEHGVVQP VKATLRSARS INGTVHHPGA DSGTTILLAS 781 GRVSPVRGYA ALPLSVRGGA FSVPGCREGY TTRAYLLDPV TRTGAVADVV LGTSASNVPL 841 RACGTIRLRV LDSKGKPKAG QDVGLSLLVE RDRATDSNAT VRAADAQPVE WFDATNYPTR 901 PKTNADGVAE LPALIPGSRY AVTVGSGANR VALGKFAIEP GKTITIPDVV LPGPSEGGTQ //