LOCUS VTR93893.1 188 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana rna polymerase sigma-e factor : RNA polymerase sigma-E factor OS=Rhodopirellula europaea SH398 GN=RESH_01186 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-3194 PROTEIN_ID VTR93893.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_38210" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|M2ACE2|M2ACE2_9PLAN ; ALN/Q_length_ratio=0.904 ; DESCRIPTION=RNA polymerase sigma-E factor OS=Rhodopirellula europaea 6C GN=RE6C_04957 PE=4 SV=1 ; EVALUE=1e-29 ; Q/S_length_ratio=0.949" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|M5S9R0|M5S9R0_9PLAN ; ALN/Q_length_ratio=0.904 ; DESCRIPTION=RNA polymerase sigma-E factor OS=Rhodopirellula europaea SH398 GN=RESH_01186 PE=4 SV=1 ; EVALUE=1e-29 ; Q/S_length_ratio=0.949" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|F2AKJ6|F2AKJ6_RHOBT ; ALN/Q_length_ratio=0.904 ; DESCRIPTION=RNA polymerase sigma-E factor OS=Rhodopirellula baltica WH47 GN=RBWH47_00968 PE=4 SV=1 ; EVALUE=7e-29 ; Q/S_length_ratio=0.949" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L7CN71|L7CN71_RHOBT ; ALN/Q_length_ratio=0.904 ; DESCRIPTION=RNA polymerase sigma-E factor OS=Rhodopirellula baltica SWK14 GN=RBSWK_01077 PE=4 SV=1 ; EVALUE=2e-28 ; Q/S_length_ratio=0.814" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|M5TIA6|M5TIA6_9PLAN ; ALN/Q_length_ratio=0.888 ; DESCRIPTION=RNA polymerase sigma-E type, Rhodopirellula baltica OS=Rhodopirellula sp. SWK7 GN=RRSWK_02250 PE=4 SV=1 ; EVALUE=2e-28 ; Q/S_length_ratio=0.979" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|K5CF58|K5CF58_RHOBT ; ALN/Q_length_ratio=0.904 ; DESCRIPTION=RNA polymerase sigma-E type, Rhodopirellula baltica OS=Rhodopirellula baltica SH28 GN=RBSH_02164 PE=4 SV=1 ; EVALUE=3e-28 ; Q/S_length_ratio=0.814" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|Q7UPG3|Q7UPG3_RHOBA ; ALN/Q_length_ratio=0.904 ; DESCRIPTION=Probable RNA polymerase sigma-E factor (ECF subfamily of sigma-70) OS=Rhodopirellula baltica (strain SH1) GN=RB6961 PE=4 SV=1 ; EVALUE=3e-28 ; Q/S_length_ratio=0.814" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|M5UBX1|M5UBX1_9PLAN ; ALN/Q_length_ratio=0.888 ; DESCRIPTION=RNA polymerase sigma-E type, Rhodopirellula baltica OS=Rhodopirellula sallentina SM41 GN=RSSM_03163 PE=4 SV=1 ; EVALUE=3e-27 ; Q/S_length_ratio=0.870" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|M5RNZ9|M5RNZ9_9PLAN ; ALN/Q_length_ratio=0.888 ; DESCRIPTION=RNA polymerase sigma-E factor OS=Rhodopirellula maiorica SM1 GN=RMSM_02030 PE=4 SV=1 ; EVALUE=1e-26 ; Q/S_length_ratio=0.964" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DN70|L0DN70_SINAD ; ALN/Q_length_ratio=0.867 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6754 PE=4 SV=1 ; EVALUE=9e-22 ; Q/S_length_ratio=0.940" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|A0A090KMG5|A0A090KMG5_9BACT ; ALN/Q_length_ratio=0.920 ; DESCRIPTION=Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1 ; EVALUE=1e-20 ; Q/S_length_ratio=0.922" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|M5UMY5|M5UMY5_9PLAN ; ALN/Q_length_ratio=0.947 ; DESCRIPTION=RNA-polymerase sigma-E factor OS=Rhodopirellula sallentina SM41 GN=RSSM_01214 PE=4 SV=1 ; EVALUE=3e-20 ; Q/S_length_ratio=0.959" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|M5RQ06|M5RQ06_9PLAN ; ALN/Q_length_ratio=0.952 ; DESCRIPTION=RNA polymerase sigma-E factor OS=Rhodopirellula maiorica SM1 GN=RMSM_01660 PE=4 SV=1 ; EVALUE=8e-19 ; Q/S_length_ratio=0.900" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DPG0|L0DPG0_SINAD ; ALN/Q_length_ratio=0.888 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6490 PE=4 SV=1 ; EVALUE=3e-18 ; Q/S_length_ratio=0.913" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|A6C666|A6C666_9PLAN ; ALN/Q_length_ratio=0.867 ; DESCRIPTION=Probable RNA-polymerase sigma-E factor OS=Planctomyces maris DSM 8797 GN=PM8797T_31208 PE=4 SV=1 ; EVALUE=1e-17 ; Q/S_length_ratio=0.959" /note="Pfam_scan:hit_1 (8..82); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:66; HMM_Length:71; EVALUE:6.7e-08; BITSCORE: 32.0" /note="Pfam_scan:hit_2 (124..177); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:52; HMM_Length:54; EVALUE:1.1e-10; BITSCORE: 40.7" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MIDTGTELDR YRPLLRLHVR QLQLGRLYRA RFDSSDVVQE SLLRAFRGID QVRGRSEAEL 61 VGWLQKVVAH TVIDLVREHS AAKRDPGLER TLCDAVDDDE TPLGAYLTAT EPGPSAQAVR 121 KEELLCLAAA LDRLPEAERD AVIAHYILEL PLAETATRLG RTTRGVGGLL FRGKRRLSAL 181 LAAPEDLA //