LOCUS VTR93817.1 843 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2: HEAT_2: T2SG protein. ACCESSION LR593886-3118 PROTEIN_ID VTR93817.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_38970" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.256 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=7e-40 ; Q/S_length_ratio=2.643" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.268 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=9e-39 ; Q/S_length_ratio=1.988" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.325 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=2e-38 ; Q/S_length_ratio=1.373" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.358 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=2e-38 ; Q/S_length_ratio=1.412" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.320 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=1e-37 ; Q/S_length_ratio=1.505" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.389 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=8e-37 ; Q/S_length_ratio=1.391" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DIU5|L0DIU5_SINAD ; ALN/Q_length_ratio=0.325 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1 ; EVALUE=7e-36 ; Q/S_length_ratio=1.474" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DCW6|L0DCW6_SINAD ; ALN/Q_length_ratio=0.228 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2795 PE=4 SV=1 ; EVALUE=9e-36 ; Q/S_length_ratio=2.190" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.306 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=2e-35 ; Q/S_length_ratio=1.749" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DHB8|L0DHB8_SINAD ; ALN/Q_length_ratio=0.314 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3834 PE=4 SV=1 ; EVALUE=3e-35 ; Q/S_length_ratio=1.522" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DE85|L0DE85_SINAD ; ALN/Q_length_ratio=0.326 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3292 PE=4 SV=1 ; EVALUE=4e-35 ; Q/S_length_ratio=1.609" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DQE6|L0DQE6_SINAD ; ALN/Q_length_ratio=0.234 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7079 PE=4 SV=1 ; EVALUE=6e-35 ; Q/S_length_ratio=0.885" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DJM8|L0DJM8_SINAD ; ALN/Q_length_ratio=0.314 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4894 PE=4 SV=1 ; EVALUE=3e-34 ; Q/S_length_ratio=1.912" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DGT0|L0DGT0_SINAD ; ALN/Q_length_ratio=0.384 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3827 PE=4 SV=1 ; EVALUE=5e-34 ; Q/S_length_ratio=1.369" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DKD8|L0DKD8_SINAD ; ALN/Q_length_ratio=0.333 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4965 PE=4 SV=1 ; EVALUE=9e-33 ; Q/S_length_ratio=0.944" /note="Pfam_scan:hit_1 (39..107); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:70; HMM_Length:71; EVALUE:5.6e-12; BITSCORE: 45.0" /note="Pfam_scan:hit_2 (131..184); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54; EVALUE:4.8e-08; BITSCORE: 32.3" /note="Pfam_scan:hit_3 (493..571); Pfam:PF13646.1:HEAT_2; Pfam_type:Family;HMM_aln_Length:59; HMM_Length:88; EVALUE:1.8e-06; BITSCORE: 28.0" /note="Pfam_scan:hit_4 (650..744); Pfam:PF08334.6:T2SG; Pfam_type:Family;HMM_aln_Length:89; HMM_Length:108; EVALUE:2e-08; BITSCORE: 33.9" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MPDAHALARL ATLAHTGLPD HTLLDRFAAD RDECAFAALV ERHGPVVLDV ARAVLRHAQD 61 AEDVFQASFL VLARNASTIR TRTSVGCWLH GVARRLALKA LRARARRSRH EAVPRVAALA 121 PGDELTWGEV RALIHDELAQ LPDALRAPVL LCHLEGLTID EAAARLALPR GTLRDRLDRG 181 RAVLRKRLAQ RGLAVAAIAF PTAISNAVPP LTVLGTARSA IRFASGIGDR SRAAELANGA 241 MPAMIPARFK LGLLFAITFG AVGLVVAGIR DVEAPAVEVP GEVSAVDPPD APPPEVVRAD 301 LPVAPPPAAA PRIGFESITV VIKPPGLSNQ PGATIRISSD GSCLCEIPGR IPPGGREPLL 361 GARLVHKLPL DRLRTLNELL KDTDWLKKDA KDVMRLHAAE YAITLEQNIG QKNHVKRTLK 421 IAGESEVYPK VLHFFDSIAH QEHLLYRLEW VPETMADARR DLDNIIGGEL GELIGRSQYV 481 IDLTRFTPWA KRTVRNSFNK QVDEVRVAVR LIGLLKLESE REHVNDLATD RDSSVRSAVA 541 LAVARLGGEK AVPVLRKMLR STSEAPWELI KLGAIAVPTI AEVIRDGGDP NDMGYEHLIR 601 AYIDNWKNVP LPFNKSIADA VKAGMVSAKE KAVRTQYHAE LLKLIEAPPP PEDPKLGRAR 661 TDVLNLANAI EAFKAKTGVY PEKLAALKDS GFVAPDTSLR DPWGSEYRYD PMGTRNSTGR 721 SDVWTVSPDK VEIGNWAADL WGEWGLLSLI SKPTVREHWE FGANMIRVYK LDNTVYRGTW 781 YTLDASQELK QINLVIDGVT HKGIYEVKGD TLRVSHGLSD KDERPKDFEG GEHATVLVFK 841 RQK //