LOCUS VTR93812.1 262 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana ribosomal large subunit pseudouridine synthase b : Pseudouridine synthase OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_2753 PE= 3 SV=1: S4: PseudoU_synth_2 protein. ACCESSION LR593886-3113 PROTEIN_ID VTR93812.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_39020" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|E8R0I7|E8R0I7_ISOPI ; ALN/Q_length_ratio=0.885 ; DESCRIPTION=Pseudouridine synthase OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_2753 PE=3 SV=1 ; EVALUE=8e-87 ; Q/S_length_ratio=0.400" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|D5SZ51|D5SZ51_PLAL2 ; ALN/Q_length_ratio=0.901 ; DESCRIPTION=Pseudouridine synthase OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_4141 PE=3 SV=1 ; EVALUE=6e-80 ; Q/S_length_ratio=0.473" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|A6C4P7|A6C4P7_9PLAN ; ALN/Q_length_ratio=0.901 ; DESCRIPTION=Pseudouridine synthase OS=Planctomyces maris DSM 8797 GN=PM8797T_25821 PE=3 SV=1 ; EVALUE=7e-77 ; Q/S_length_ratio=0.744" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|F0SMC1|F0SMC1_PLABD ; ALN/Q_length_ratio=0.912 ; DESCRIPTION=Pseudouridine synthase OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_4529 PE=3 SV=1 ; EVALUE=1e-76 ; Q/S_length_ratio=0.712" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L7CHI6|L7CHI6_RHOBT ; ALN/Q_length_ratio=0.931 ; DESCRIPTION=Pseudouridine synthase OS=Rhodopirellula baltica SWK14 GN=RBSWK_02714 PE=3 SV=1 ; EVALUE=6e-75 ; Q/S_length_ratio=0.663" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|M5SHK7|M5SHK7_9PLAN ; ALN/Q_length_ratio=0.893 ; DESCRIPTION=Pseudouridine synthase OS=Rhodopirellula europaea SH398 GN=RESH_02194 PE=3 SV=1 ; EVALUE=6e-75 ; Q/S_length_ratio=0.665" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|M2B134|M2B134_9PLAN ; ALN/Q_length_ratio=0.931 ; DESCRIPTION=Pseudouridine synthase OS=Rhodopirellula europaea 6C GN=RE6C_03333 PE=3 SV=1 ; EVALUE=7e-75 ; Q/S_length_ratio=0.665" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|K5CII8|K5CII8_RHOBT ; ALN/Q_length_ratio=0.893 ; DESCRIPTION=Pseudouridine synthase OS=Rhodopirellula baltica SH28 GN=RBSH_00601 PE=3 SV=1 ; EVALUE=8e-75 ; Q/S_length_ratio=0.663" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|Q7UUP0|Q7UUP0_RHOBA ; ALN/Q_length_ratio=0.927 ; DESCRIPTION=Pseudouridine synthase OS=Rhodopirellula baltica (strain SH1) GN=RB3174 PE=3 SV=1 ; EVALUE=1e-74 ; Q/S_length_ratio=0.663" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|F2AZ13|F2AZ13_RHOBT ; ALN/Q_length_ratio=0.927 ; DESCRIPTION=Pseudouridine synthase OS=Rhodopirellula baltica WH47 GN=RBWH47_04935 PE=3 SV=1 ; EVALUE=1e-74 ; Q/S_length_ratio=0.663" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|M5T4D0|M5T4D0_9PLAN ; ALN/Q_length_ratio=0.908 ; DESCRIPTION=Pseudouridine synthase OS=Rhodopirellula sp. SWK7 GN=RRSWK_03442 PE=3 SV=1 ; EVALUE=4e-74 ; Q/S_length_ratio=0.650" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|M5UF79|M5UF79_9PLAN ; ALN/Q_length_ratio=0.908 ; DESCRIPTION=Pseudouridine synthase OS=Rhodopirellula sallentina SM41 GN=RSSM_03905 PE=3 SV=1 ; EVALUE=4e-73 ; Q/S_length_ratio=0.649" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|X0RLF3|X0RLF3_9ZZZZ ; ALN/Q_length_ratio=0.966 ; DESCRIPTION=Marine sediment metagenome DNA, contig: S01H1_L02063 OS=marine sediment metagenome GN=S01H1_07554 PE=4 SV=1 ; EVALUE=8e-71 ; Q/S_length_ratio=0.949" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|A3ZQL4|A3ZQL4_9PLAN ; ALN/Q_length_ratio=0.885 ; DESCRIPTION=Pseudouridine synthase OS=Blastopirellula marina DSM 3645 GN=DSM3645_20312 PE=3 SV=1 ; EVALUE=2e-69 ; Q/S_length_ratio=0.507" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|Q1Q1Q0|Q1Q1Q0_9BACT ; ALN/Q_length_ratio=0.882 ; DESCRIPTION=Pseudouridine synthase OS=Candidatus Kuenenia stuttgartiensis GN=kuste3173 PE=3 SV=1 ; EVALUE=7e-68 ; Q/S_length_ratio=1.008" /note="Pfam_scan:hit_1 (2..47); Pfam:PF01479.20:S4; Pfam_type:Domain;HMM_aln_Length:43; HMM_Length:48; EVALUE:3.1e-10; BITSCORE: 39.3" /note="Pfam_scan:hit_2 (62..195); Pfam:PF00849.17:PseudoU_synth_2; Pfam_type:Family;HMM_aln_Length:161; HMM_Length:164; EVALUE:6e-20; BITSCORE: 71.7" /note="GO_domain:GO:0003723" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0016853" /note="Enzyme_Code:EC:5.4.99.12" BEGIN 1 MQRLNKYLAH AGVGSRRHCD KLIAAGRVKV DGVRVKELGL KIDPAHHQVA VDDQPVKAEK 61 LVYWAVNKPV GHLCTNHDPA GRPRAVDLLP HVEQRVYTVG RLDEGSDGLL LMTNDGDLAM 121 GLTHPRYGVP KTYFVLVAGR PTDEDLQKLL DGVWLSDGKV RAKSVKRVKA QGNGTWLRVI 181 LTEGKNREIR RMLAKLDHKV MRLKRVAIGP VKLDKLPKGK ARRISEDELK ELKLFVTKSQ 241 EKITAARLRA SEKKADPGDR PA //