LOCUS VTR93493.1 647 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana fis family transcriptional regulator : Transcriptional regulator, NifA subfamily, Fis Family OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_3595 PE=4 SV=1: FHA: GAF_2: Sigma54_activat: HTH_8 protein. ACCESSION LR593886-2794 PROTEIN_ID VTR93493.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_42210" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|D2QZ64|D2QZ64_PIRSD ; ALN/Q_length_ratio=1.029 ; DESCRIPTION=Transcriptional regulator, NifA subfamily, Fis Family OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_3595 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.956" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|A4A0U9|A4A0U9_9PLAN ; ALN/Q_length_ratio=1.034 ; DESCRIPTION=Ornithine decarboxylase inhibitor-putative sigma54 transciptional regulator OS=Blastopirellula marina DSM 3645 GN=DSM3645_24812 PE=4 SV=1 ; EVALUE=1e-176 ; Q/S_length_ratio=0.953" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|D5SYE9|D5SYE9_PLAL2 ; ALN/Q_length_ratio=1.012 ; DESCRIPTION=Sigma-54 factor interaction domain-containing protein OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_1847 PE=4 SV=1 ; EVALUE=1e-168 ; Q/S_length_ratio=0.959" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|A6CG13|A6CG13_9PLAN ; ALN/Q_length_ratio=0.909 ; DESCRIPTION=Ornithine decarboxylase inhibitor-putative sigma54 transciptional regulator (Fragment) OS=Planctomyces maris DSM 8797 GN=PM8797T_17439 PE=4 SV=1 ; EVALUE=1e-165 ; Q/S_length_ratio=1.071" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|F0SSP2|F0SSP2_PLABD ; ALN/Q_length_ratio=0.989 ; DESCRIPTION=Sigma54 specific transcriptional regulator, Fis family OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_2759 PE=4 SV=1 ; EVALUE=1e-160 ; Q/S_length_ratio=0.961" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|M5R6Z9|M5R6Z9_9PLAN ; ALN/Q_length_ratio=1.065 ; DESCRIPTION=Two component, sigma54 specific, transcriptional regulator, Fis family OS=Rhodopirellula maiorica SM1 GN=RMSM_07801 PE=4 SV=1 ; EVALUE=1e-135 ; Q/S_length_ratio=0.924" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|M5TL88|M5TL88_9PLAN ; ALN/Q_length_ratio=0.716 ; DESCRIPTION=Two component, sigma54 specific, transcriptional regulator, Fis family OS=Rhodopirellula sp. SWK7 GN=RRSWK_02614 PE=4 SV=1 ; EVALUE=1e-113 ; Q/S_length_ratio=0.988" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|M5RZA9|M5RZA9_9PLAN ; ALN/Q_length_ratio=1.105 ; DESCRIPTION=Sigma54 specific transcriptional regulator, Fis family OS=Rhodopirellula europaea SH398 GN=RESH_04785 PE=4 SV=1 ; EVALUE=1e-112 ; Q/S_length_ratio=0.895" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|D2R3W1|D2R3W1_PIRSD ; ALN/Q_length_ratio=0.918 ; DESCRIPTION=Sigma54 specific transcriptional regulator, Fis family OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_4161 PE=4 SV=1 ; EVALUE=1e-112 ; Q/S_length_ratio=1.059" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|M5U248|M5U248_9PLAN ; ALN/Q_length_ratio=0.728 ; DESCRIPTION=Two component, sigma54 specific, Fis family transcriptional regulator OS=Rhodopirellula sallentina SM41 GN=RSSM_03074 PE=4 SV=1 ; EVALUE=1e-111 ; Q/S_length_ratio=0.995" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|A3ZZQ6|A3ZZQ6_9PLAN ; ALN/Q_length_ratio=0.923 ; DESCRIPTION=Nitrogen fixation protein anfA (Sigma-54 dependendent transcription regulator) OS=Blastopirellula marina DSM 3645 GN=DSM3645_16050 PE=4 SV=1 ; EVALUE=1e-109 ; Q/S_length_ratio=1.057" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|M2APJ8|M2APJ8_9PLAN ; ALN/Q_length_ratio=0.697 ; DESCRIPTION=Sigma54 specific transcriptional regulator, Fis family OS=Rhodopirellula europaea 6C GN=RE6C_04474 PE=4 SV=1 ; EVALUE=1e-107 ; Q/S_length_ratio=0.897" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|K5DLD2|K5DLD2_RHOBT ; ALN/Q_length_ratio=0.699 ; DESCRIPTION=Transcriptional regulator, NifA subfamily, Fis Family OS=Rhodopirellula baltica SH28 GN=RBSH_01138 PE=4 SV=1 ; EVALUE=1e-106 ; Q/S_length_ratio=0.860" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L7CMU7|L7CMU7_RHOBT ; ALN/Q_length_ratio=0.699 ; DESCRIPTION=Transcriptional regulator, NifA subfamily, Fis Family OS=Rhodopirellula baltica SWK14 GN=RBSWK_00833 PE=4 SV=1 ; EVALUE=1e-106 ; Q/S_length_ratio=0.860" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|Q7UT14|Q7UT14_RHOBA ; ALN/Q_length_ratio=0.708 ; DESCRIPTION=Ornithine decarboxylase inhibitor-putative sigma54 transciptional regulator OS=Rhodopirellula baltica (strain SH1) GN=RB4179 PE=4 SV=1 ; EVALUE=1e-105 ; Q/S_length_ratio=0.855" /note="Pfam_scan:hit_1 (31..95); Pfam:PF00498.21:FHA; Pfam_type:Family;HMM_aln_Length:67; HMM_Length:68; EVALUE:8.6e-14; BITSCORE: 51.4" /note="Pfam_scan:hit_2 (175..313); Pfam:PF13185.1:GAF_2; Pfam_type:Domain;HMM_aln_Length:144; HMM_Length:148; EVALUE:1.4e-09; BITSCORE: 38.6" /note="Pfam_scan:hit_3 (338..505); Pfam:PF00158.21:Sigma54_activat; Pfam_type:Domain;HMM_aln_Length:166; HMM_Length:168; EVALUE:3e-66; BITSCORE: 222.0" /note="Pfam_scan:hit_4 (602..643); Pfam:PF02954.14:HTH_8; Pfam_type:Domain;HMM_aln_Length:40; HMM_Length:42; EVALUE:4.6e-15; BITSCORE: 54.8" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0043167" /note="GO_domain:GO:0008134" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MPMAQPPSAF LVARRDDGFG DVFPLHEGTR YKLGRAPTNR VVLRDDLCSR EHAEVFAAEG 61 GWFVRDLGSL NGTHLNGETL RTDRALRPLD EVRVGRTRLL FIEEMSQLPD LPKSAIKPVE 121 KVDGLEIRKR LSQTRYQQTG ATNVPEPETV RVDARVAPPQ AIGVLYRLAL DMAAAADTGE 181 LCALAVDSVF RATPAEVVAV LALKEPKELE LLTHRVRGGG PATYHKVSQF VSSEVLSGKQ 241 AVLAENVAAN RMLADRDSIA ELKVASLICA PIVFDDKVLG LLHLYRTLGH SPLNTDDLEF 301 TLAVARQLGT AWHKLTRQVN LSAENRSLRT QLRIESEIVG GSEPLRKIEG QIARVGETRA 361 TVLIRGESGS GKELVARAIH QNSPRHEGAF ICLNCAALTE TLLESELFGH EKGAFTGATE 421 RMVGKFEAAD NGTIFLDEIG EMALTTQAKF LRVLEGHPFE RVGGNVAIKV DVRVVAATNR 481 PLEEAVRAGT FRRDLFYRLQ VVQLDVPPLR ERLDDVPLLA EHFLKKFVRE TGRKIKSFTP 541 AALDKLRTYR WPGNVRELRN VIERAVALGI GPHLDTADIW LSELDVGAPV VGVAAFAYRP 601 EPLDDVEKRH ILETLKHTDW NKSKAATILG IERSTLDRKI EKFGLVK //