LOCUS VTR93344.1 203 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana rna polymerase sigma-70 ecf-like protein : DNA-directed RNA polymerase specialized sigma subunit, sigma24 OS=Singulisphaera acidiphila (strain ATCC BAA- 1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4904 PE= 4 SV=1: Sigma70_ECF protein. ACCESSION LR593886-2645 PROTEIN_ID VTR93344.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_43700" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DJN8|L0DJN8_SINAD ; ALN/Q_length_ratio=0.990 ; DESCRIPTION=DNA-directed RNA polymerase specialized sigma subunit, sigma24 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4904 PE=4 SV=1 ; EVALUE=1e-61 ; Q/S_length_ratio=0.995" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DPY7|L0DPY7_SINAD ; ALN/Q_length_ratio=0.941 ; DESCRIPTION=DNA-directed RNA polymerase specialized sigma subunit, sigma24 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7395 PE=4 SV=1 ; EVALUE=2e-58 ; Q/S_length_ratio=1.020" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0D9Z6|L0D9Z6_SINAD ; ALN/Q_length_ratio=1.005 ; DESCRIPTION=DNA-directed RNA polymerase specialized sigma subunit, sigma24 OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1052 PE=4 SV=1 ; EVALUE=4e-58 ; Q/S_length_ratio=0.962" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|M5T897|M5T897_9PLAN ; ALN/Q_length_ratio=0.941 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_02117 PE=4 SV=1 ; EVALUE=2e-46 ; Q/S_length_ratio=0.871" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|F0SMJ3|F0SMJ3_PLABD ; ALN/Q_length_ratio=0.975 ; DESCRIPTION=Uncharacterized protein OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_0125 PE=4 SV=1 ; EVALUE=2e-44 ; Q/S_length_ratio=0.894" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|M5U7U6|M5U7U6_9PLAN ; ALN/Q_length_ratio=0.941 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula sallentina SM41 GN=RSSM_01032 PE=4 SV=1 ; EVALUE=8e-44 ; Q/S_length_ratio=0.995" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|F2ATN4|F2ATN4_RHOBT ; ALN/Q_length_ratio=0.941 ; DESCRIPTION=RNA polymerase ECF-type sigma factor OS=Rhodopirellula baltica WH47 GN=RBWH47_03907 PE=4 SV=1 ; EVALUE=2e-43 ; Q/S_length_ratio=0.923" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|M5U100|M5U100_9PLAN ; ALN/Q_length_ratio=0.975 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula sallentina SM41 GN=RSSM_03451 PE=4 SV=1 ; EVALUE=3e-43 ; Q/S_length_ratio=0.815" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L7CDC2|L7CDC2_RHOBT ; ALN/Q_length_ratio=0.911 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula baltica SWK14 GN=RBSWK_04430 PE=4 SV=1 ; EVALUE=4e-43 ; Q/S_length_ratio=0.949" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|K5E2B9|K5E2B9_RHOBT ; ALN/Q_length_ratio=0.911 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula baltica SH28 GN=RBSH_04631 PE=4 SV=1 ; EVALUE=4e-43 ; Q/S_length_ratio=0.923" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|Q7UGA3|Q7UGA3_RHOBA ; ALN/Q_length_ratio=0.941 ; DESCRIPTION=Putative uncharacterized protein OS=Rhodopirellula baltica (strain SH1) GN=RB8027 PE=4 SV=1 ; EVALUE=5e-43 ; Q/S_length_ratio=0.875" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|M5SVC9|M5SVC9_9PLAN ; ALN/Q_length_ratio=0.911 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_06786 PE=4 SV=1 ; EVALUE=2e-42 ; Q/S_length_ratio=0.809" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|M5RWF3|M5RWF3_9PLAN ; ALN/Q_length_ratio=0.911 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula maiorica SM1 GN=RMSM_03346 PE=4 SV=1 ; EVALUE=2e-39 ; Q/S_length_ratio=0.857" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|M2AUF9|M2AUF9_9PLAN ; ALN/Q_length_ratio=0.911 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula europaea 6C GN=RE6C_05647 PE=4 SV=1 ; EVALUE=2e-37 ; Q/S_length_ratio=0.927" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|M5UBY8|M5UBY8_9PLAN ; ALN/Q_length_ratio=0.995 ; DESCRIPTION=RNA polymerase sigma-70 ECF-like protein OS=Rhodopirellula sallentina SM41 GN=RSSM_05025 PE=4 SV=1 ; EVALUE=3e-37 ; Q/S_length_ratio=0.971" /note="Pfam_scan:hit_1 (6..203); Pfam:PF07638.6:Sigma70_ECF; Pfam_type:Family;HMM_aln_Length:179; HMM_Length:185; EVALUE:5.9e-39; BITSCORE: 133.6" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MSLVPEGSIT IWLEQLKGGD PSAVEPLWNR YFTKLVTLAR NQLRSAPRAA ADEEDVALSA 61 FDSFCHRVAE NRFPRLEDRD DLWQVLFVIT TRKATGLVRR EMRQKRGCGR VVHASAAGSP 121 TQAYDALNSA VAPEPSPEFT AAIAEECELL LSLLGEGELR KVAICKMESY TNVEIAKKLG 181 RSVATVERKL ATIREIWERS INR //