LOCUS VTR93098.1 349 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana RNA-directed DNA polymerase (Reverse transcriptase) OS=mine drainage metagenome GN=B2A_12249 PE=4 SV=1: RVT_1: GIIM protein. ACCESSION LR593886-2399 PROTEIN_ID VTR93098.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_46160" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|T1BRQ6|T1BRQ6_9ZZZZ ; ALN/Q_length_ratio=0.960 ; DESCRIPTION=RNA-directed DNA polymerase (Reverse transcriptase) (Fragment) OS=mine drainage metagenome GN=B1B_02047 PE=4 SV=1 ; EVALUE=1e-142 ; Q/S_length_ratio=0.802" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|T0YSN7|T0YSN7_9ZZZZ ; ALN/Q_length_ratio=0.960 ; DESCRIPTION=RNA-directed DNA polymerase (Reverse transcriptase) OS=mine drainage metagenome GN=B2A_12249 PE=4 SV=1 ; EVALUE=1e-142 ; Q/S_length_ratio=0.857" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|B4CYA7|B4CYA7_9BACT ; ALN/Q_length_ratio=1.017 ; DESCRIPTION=RNA-directed DNA polymerase (Reverse transcriptase) OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_1645 PE=4 SV=1 ; EVALUE=1e-137 ; Q/S_length_ratio=0.724" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|V2K9T6|V2K9T6_SALDZ ; ALN/Q_length_ratio=0.963 ; DESCRIPTION=Uncharacterized protein OS=Salmonella enterica subsp. diarizonae serovar 60:r:e,n,x,z15 str. 01-0170 GN=SED60170_01182 PE=4 SV=1 ; EVALUE=1e-133 ; Q/S_length_ratio=0.729" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|T1C5P1|T1C5P1_9ZZZZ ; ALN/Q_length_ratio=0.894 ; DESCRIPTION=RNA-directed DNA polymerase (Reverse transcriptase) (Fragment) OS=mine drainage metagenome GN=B2A_03620 PE=4 SV=1 ; EVALUE=1e-130 ; Q/S_length_ratio=1.080" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|Q89BF9|Q89BF9_BRADU ; ALN/Q_length_ratio=0.966 ; DESCRIPTION=Bll8195 protein OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=bll8195 PE=4 SV=1 ; EVALUE=1e-129 ; Q/S_length_ratio=0.788" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|G7DNY7|G7DNY7_BRAJP ; ALN/Q_length_ratio=0.966 ; DESCRIPTION=Uncharacterized protein OS=Bradyrhizobium japonicum USDA 6 GN=BJ6T_88080 PE=4 SV=1 ; EVALUE=1e-129 ; Q/S_length_ratio=0.790" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|A0A023XW16|A0A023XW16_BRAJP ; ALN/Q_length_ratio=0.966 ; DESCRIPTION=Putative prophage LambdaSa1, reverse transcriptase/maturase family protein OS=Bradyrhizobium japonicum SEMIA 5079 GN=BJS_08589 PE=4 SV=1 ; EVALUE=1e-129 ; Q/S_length_ratio=0.868" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|F9ZUD0|F9ZUD0_ACICS ; ALN/Q_length_ratio=0.871 ; DESCRIPTION=RNA-directed DNA polymerase (Reverse transcriptase) OS=Acidithiobacillus caldus (strain SM-1) GN=Atc_m208 PE=4 SV=1 ; EVALUE=1e-124 ; Q/S_length_ratio=1.042" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|W3V5N8|W3V5N8_PHOTE ; ALN/Q_length_ratio=0.968 ; DESCRIPTION=Retron-type reverse transcriptase OS=Photorhabdus temperata subsp. khanii NC19 GN=PTE_03105 PE=4 SV=1 ; EVALUE=5e-99 ; Q/S_length_ratio=0.752" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|G0JP17|G0JP17_9GAMM ; ALN/Q_length_ratio=0.977 ; DESCRIPTION=RNA-directed DNA polymerase (Reverse transcriptase) OS=Acidithiobacillus ferrivorans SS3 GN=Acife_2323 PE=4 SV=1 ; EVALUE=3e-98 ; Q/S_length_ratio=0.791" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|V5C6R6|V5C6R6_9GAMM ; ALN/Q_length_ratio=0.963 ; DESCRIPTION=RNA-directed DNA polymerase OS=Methyloglobulus morosus KoM1 GN=MGMO_3c00040 PE=4 SV=1 ; EVALUE=2e-92 ; Q/S_length_ratio=0.755" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|T1A3U3|T1A3U3_9ZZZZ ; ALN/Q_length_ratio=0.963 ; DESCRIPTION=RNA-directed DNA polymerase (Reverse transcriptase) OS=mine drainage metagenome GN=B1B_10975 PE=4 SV=1 ; EVALUE=7e-92 ; Q/S_length_ratio=0.788" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|I2IBG2|I2IBG2_9BURK ; ALN/Q_length_ratio=0.963 ; DESCRIPTION=Retron-type reverse transcriptase OS=Burkholderia sp. Ch1-1 GN=BCh11DRAFT_07959 PE=4 SV=1 ; EVALUE=2e-91 ; Q/S_length_ratio=0.800" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|I2IX07|I2IX07_9BURK ; ALN/Q_length_ratio=0.963 ; DESCRIPTION=Retron-type reverse transcriptase OS=Burkholderia sp. Ch1-1 GN=BCh11DRAFT_03074 PE=4 SV=1 ; EVALUE=7e-91 ; Q/S_length_ratio=0.817" /note="Pfam_scan:hit_1 (3..216); Pfam:PF00078.22:RVT_1; Pfam_type:Family;HMM_aln_Length:213; HMM_Length:214; EVALUE:3.2e-28; BITSCORE: 98.5" /note="Pfam_scan:hit_2 (237..317); Pfam:PF08388.6:GIIM; Pfam_type:Family;HMM_aln_Length:75; HMM_Length:80; EVALUE:9.6e-15; BITSCORE: 54.1" BEGIN 1 MWIAKSNGGP RPLGIPSIRD RVAQVAVLLV IGPIFEADLC DEQYGFRSGI DAKMAVRRVY 61 SNVTERGLRE VVAADLSDYF NTIAHGPLMR CLSRRIADGS VLSVVKRWLQ APVAERHERG 121 KRRTTVAADT NRGTPQGGVA SPLLANLYFR RFVLAWKPFG REQRLRAHVV NYADDLVISC 181 RPGRKLIARL GLSVNERKTR LATLPEESID FLGYTIGQFH GRGDRPYIGT RPSKKSVCKL 241 RARIHEETSS RWNWQQPAER VEVLNPILRG WCGYFNQGPV VRVYRAVRAY IERRLRRWLM 301 RREQRRGTGY KRYPGRYLDE ELGLFRSPTN ARLRRMRRLE GPNESRPRR //