LOCUS VTR93007.1 621 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2: PD40 protein. ACCESSION LR593886-2308 PROTEIN_ID VTR93007.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_47070" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.456 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=5e-45 ; Q/S_length_ratio=1.011" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.435 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=6e-40 ; Q/S_length_ratio=1.465" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DIU5|L0DIU5_SINAD ; ALN/Q_length_ratio=0.382 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1 ; EVALUE=7e-40 ; Q/S_length_ratio=1.086" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.417 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=2e-39 ; Q/S_length_ratio=1.247" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0D7N8|L0D7N8_SINAD ; ALN/Q_length_ratio=0.472 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0215 PE=4 SV=1 ; EVALUE=1e-36 ; Q/S_length_ratio=1.187" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.314 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=1e-36 ; Q/S_length_ratio=1.947" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.473 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=2e-36 ; Q/S_length_ratio=1.025" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DGT0|L0DGT0_SINAD ; ALN/Q_length_ratio=0.515 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3827 PE=4 SV=1 ; EVALUE=3e-36 ; Q/S_length_ratio=1.008" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DIV6|L0DIV6_SINAD ; ALN/Q_length_ratio=0.254 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4570 PE=4 SV=1 ; EVALUE=2e-35 ; Q/S_length_ratio=1.237" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DDY6|L0DDY6_SINAD ; ALN/Q_length_ratio=0.435 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2787 PE=4 SV=1 ; EVALUE=2e-35 ; Q/S_length_ratio=1.137" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DQA3|L0DQA3_SINAD ; ALN/Q_length_ratio=0.643 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6979 PE=4 SV=1 ; EVALUE=4e-35 ; Q/S_length_ratio=1.396" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.390 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=5e-35 ; Q/S_length_ratio=1.288" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0D9N2|L0D9N2_SINAD ; ALN/Q_length_ratio=0.942 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1558 PE=4 SV=1 ; EVALUE=1e-34 ; Q/S_length_ratio=0.692" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DA12|L0DA12_SINAD ; ALN/Q_length_ratio=0.488 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1318 PE=4 SV=1 ; EVALUE=1e-34 ; Q/S_length_ratio=0.858" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DD82|L0DD82_SINAD ; ALN/Q_length_ratio=0.554 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2507 PE=4 SV=1 ; EVALUE=2e-34 ; Q/S_length_ratio=0.690" /note="Pfam_scan:hit_1 (46..116); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:63; HMM_Length:71; EVALUE:6.8e-10; BITSCORE: 38.4" /note="Pfam_scan:hit_2 (139..191); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54; EVALUE:2.5e-09; BITSCORE: 36.4" /note="Pfam_scan:hit_3 (541..565); Pfam:PF07676.7:PD40; Pfam_type:Repeat;HMM_aln_Length:16; HMM_Length:39; EVALUE:0.036; BITSCORE: 13.7" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MPTHTLSAVV SRVRRAALGA APNVRTDGGL LGAFLADRDS DAFAELVARF GPMVFAVCRR 61 LTGHHQDAED AFQAAFVVLA RKAGSVSPRE AVGVWLYGVA VRTAREARAV ASKRRTREVP 121 TDRLPDVARA EQQPDDTGTV LHEELAGLPE KFRALLVLCD LEGRPQVEVA DRLELPVGTV 181 YSRLATARRL LAERLRQRGV ALPVCGLSVW LASTARATVP AELSAKAVTA AVAPDSVPAA 241 VAALTLRVLQ TMSLHKLNVV AAGGLVLVLG WVIAECLTGG GFAQEPPRPA AVETKKVDEP 301 KPQPAPKKAG PGTLLLTREG PFHVLTPDGK KVSEFSAPEK THGSGSGRLS PDGTRVAVVV 361 VEDGPPRATP PETWPFKVVV RTLGKLDSEK TWDLPAQNLN LNWTADGKRL VVVKHPDVEH 421 GKNVENLLLD PETGKTSTLD LPAGVQVLDC GKDGKTFLVT FAEEKKKKIG LAVLGDATVR 481 ELVEVPDWPP GGVTGRLSPD GTKVLFSAAD PERKNAHKWG LSHRPYLLDV KTKKAEPVPE 541 FPENGRVTGI AWAPDGRRIA YAWQQLHDEL LKKDQISAND AAIETEAFLV VADANGKNPK 601 TITSDKGPFA TNMIFGTIDW R //