LOCUS VTR92103.1 516 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-1404 PROTEIN_ID VTR92103.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_56110" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.576 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=5e-44 ; Q/S_length_ratio=1.217" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.498 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=5e-43 ; Q/S_length_ratio=1.036" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.510 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=3e-39 ; Q/S_length_ratio=0.840" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DIU5|L0DIU5_SINAD ; ALN/Q_length_ratio=0.519 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1 ; EVALUE=3e-38 ; Q/S_length_ratio=0.902" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.492 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=4e-38 ; Q/S_length_ratio=0.921" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DQE6|L0DQE6_SINAD ; ALN/Q_length_ratio=0.541 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7079 PE=4 SV=1 ; EVALUE=3e-37 ; Q/S_length_ratio=0.541" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DDR3|L0DDR3_SINAD ; ALN/Q_length_ratio=0.498 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1 ; EVALUE=2e-34 ; Q/S_length_ratio=0.468" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.529 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=2e-34 ; Q/S_length_ratio=0.864" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DHB1|L0DHB1_SINAD ; ALN/Q_length_ratio=0.610 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4458 PE=4 SV=1 ; EVALUE=3e-34 ; Q/S_length_ratio=0.530" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0DD82|L0DD82_SINAD ; ALN/Q_length_ratio=0.510 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2507 PE=4 SV=1 ; EVALUE=1e-33 ; Q/S_length_ratio=0.573" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DIK4|L0DIK4_SINAD ; ALN/Q_length_ratio=0.568 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4459 PE=4 SV=1 ; EVALUE=2e-33 ; Q/S_length_ratio=0.527" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.579 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=2e-33 ; Q/S_length_ratio=1.071" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DHB8|L0DHB8_SINAD ; ALN/Q_length_ratio=0.624 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3834 PE=4 SV=1 ; EVALUE=3e-33 ; Q/S_length_ratio=0.931" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DHG5|L0DHG5_SINAD ; ALN/Q_length_ratio=0.626 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3888 PE=4 SV=1 ; EVALUE=7e-33 ; Q/S_length_ratio=0.735" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DKD8|L0DKD8_SINAD ; ALN/Q_length_ratio=0.591 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4965 PE=4 SV=1 ; EVALUE=1e-32 ; Q/S_length_ratio=0.578" /note="Pfam_scan:hit_1 (48..118); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:67; HMM_Length:71; EVALUE:2.8e-09; BITSCORE: 36.4" /note="Pfam_scan:hit_2 (141..194); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54; EVALUE:4.7e-11; BITSCORE: 41.9" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MVRKHDAPDT LPALVRATLS SVRLAELSDG ELLVRFVVTR DNELFAELVR RLGPTVLGVC 61 RRLLGTGPDA EDAFQVAFMV LVRRAGSVRP PGRVAAWLHG VALLTARKAR HVRNRRAARE 121 SRPDAPVERA GPCREWEPDL AEVLDAELDR LPAKYRLPVV LCEVRELTVA QAAAELGWPV 181 GTVASRLSRG RAALANRLRR RGVTVGSVLF ATGGIRAATA QVPAHFIGAA VRAADTGGTV 241 SSAVTLPLLN EVLRTMTLSQ VRMVGACVLV TAAVLGGFGL LRTTVGAAAP SLENPAVAKK 301 EPLNRAIDED DDRRAAAELV LTIQVVSVKE VVNGANKDVT VIAKVLGVEK SAFGTRKGEE 361 IAITYTDSAK LIPGSESMPA LEKGGVYPAF LNRNDKEYQP AAWAASFRMT PGGGRVKENK 421 NAAERFGAAM HTVDTFLKAK TTDPKRDELQ KAVIAIGQSG EHNGYVWVHA RLSWECGFLE 481 ARKAELGNNL TKEQVKEIDD QVAHLKRTQI LIDAPK //