LOCUS VTR91975.1 621 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1558 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-1276 PROTEIN_ID VTR91975.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_57390" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0D9N2|L0D9N2_SINAD ; ALN/Q_length_ratio=0.918 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1558 PE=4 SV=1 ; EVALUE=1e-40 ; Q/S_length_ratio=0.692" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.441 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=3e-40 ; Q/S_length_ratio=1.465" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.444 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=2e-38 ; Q/S_length_ratio=1.109" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DT29|L0DT29_SINAD ; ALN/Q_length_ratio=0.412 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7487 PE=4 SV=1 ; EVALUE=4e-38 ; Q/S_length_ratio=1.247" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.456 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=1e-37 ; Q/S_length_ratio=1.011" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DHG5|L0DHG5_SINAD ; ALN/Q_length_ratio=0.451 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3888 PE=4 SV=1 ; EVALUE=9e-35 ; Q/S_length_ratio=0.885" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DQA3|L0DQA3_SINAD ; ALN/Q_length_ratio=0.444 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6979 PE=4 SV=1 ; EVALUE=4e-34 ; Q/S_length_ratio=1.396" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DKD8|L0DKD8_SINAD ; ALN/Q_length_ratio=0.391 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4965 PE=4 SV=1 ; EVALUE=8e-34 ; Q/S_length_ratio=0.695" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DJM8|L0DJM8_SINAD ; ALN/Q_length_ratio=0.414 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4894 PE=4 SV=1 ; EVALUE=1e-33 ; Q/S_length_ratio=1.408" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.386 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=5e-33 ; Q/S_length_ratio=1.288" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0D7L2|L0D7L2_SINAD ; ALN/Q_length_ratio=0.465 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0185 PE=4 SV=1 ; EVALUE=1e-32 ; Q/S_length_ratio=1.240" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0DFV7|L0DFV7_SINAD ; ALN/Q_length_ratio=0.467 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3442 PE=4 SV=1 ; EVALUE=2e-32 ; Q/S_length_ratio=0.506" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.349 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=2e-32 ; Q/S_length_ratio=1.025" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DDY6|L0DDY6_SINAD ; ALN/Q_length_ratio=0.399 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2787 PE=4 SV=1 ; EVALUE=3e-32 ; Q/S_length_ratio=1.137" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L0DDR3|L0DDR3_SINAD ; ALN/Q_length_ratio=0.522 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1 ; EVALUE=6e-32 ; Q/S_length_ratio=0.564" /note="Pfam_scan:hit_1 (44..116); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:63; HMM_Length:71; EVALUE:3.6e-08; BITSCORE: 32.8" /note="Pfam_scan:hit_2 (138..191); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:52; HMM_Length:54; EVALUE:5.7e-12; BITSCORE: 44.9" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MSRAALSAFV SRASRGAEPL PVETDGGLLT RFVRERDEGA FAALIHRFGP MVLRVCRRVT 61 RDAHLAEDAF QAAFVVLARR GADVYPAGAV RSWLYGVAVR TAREARTVAA RRRAREVPVA 121 QVPDRAAELA ERPDADALRA LDEEVGALSE HLRAAVVLCE LDGLSRADAA ERLGVPEGTL 181 SSRLAKARKL LASRLRARGV TAPAVGLAVL TEAALAPALV ARTSALFHAT APLPRAVATI 241 SNGVLRTMFL RKLTLGSAGA ALLAVACLAA WGALPASEAK EPPKANAPLV LKAVSTRATQ 301 PPAAKPVAPG RLLVWKENKH VFLTPDGKEG DTFVSDHPDK KAIFNEPVLS PDGKIVAFRV 361 NDDPPTDRDG NRKQHLYFRD AEGKKAGVKI ELNPMTLAWD SDGKALLVTE FIPAKELKDT 421 ELLVWRIDIA TQKKTKLDLP KHTVVYAATP DGEAFVGAVF DFKAMKISLA TISRDGKDVT 481 KLCEVRNEMP DPRLSPDGTK FLFQDYDADE KPAKGTPQLR RLFVYDLKAQ SRKRVVDVPV 541 NASLIGYCWS PDGKHIAYTW KQVQPGVPLA VNTENMDDPK LNTETESHLI ISDATGKNPK 601 TVMSIKSEFA PRTTIGALDW R //