LOCUS VTR91796.1 393 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0185 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-1097 PROTEIN_ID VTR91796.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_59180" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0D7L2|L0D7L2_SINAD ; ALN/Q_length_ratio=0.751 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0185 PE=4 SV=1 ; EVALUE=1e-43 ; Q/S_length_ratio=0.784" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|L0DGG0|L0DGG0_SINAD ; ALN/Q_length_ratio=0.720 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4264 PE=4 SV=1 ; EVALUE=5e-42 ; Q/S_length_ratio=0.927" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ; ALN/Q_length_ratio=0.486 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5383 PE=4 SV=1 ; EVALUE=1e-39 ; Q/S_length_ratio=1.232" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L0DM90|L0DM90_SINAD ; ALN/Q_length_ratio=0.784 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1 ; EVALUE=3e-37 ; Q/S_length_ratio=0.640" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0DJM8|L0DJM8_SINAD ; ALN/Q_length_ratio=0.740 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4894 PE=4 SV=1 ; EVALUE=2e-36 ; Q/S_length_ratio=0.891" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|L0DQA3|L0DQA3_SINAD ; ALN/Q_length_ratio=0.733 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6979 PE=4 SV=1 ; EVALUE=4e-36 ; Q/S_length_ratio=0.883" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DIU5|L0DIU5_SINAD ; ALN/Q_length_ratio=0.626 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4592 PE=4 SV=1 ; EVALUE=5e-35 ; Q/S_length_ratio=0.687" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L0DA12|L0DA12_SINAD ; ALN/Q_length_ratio=0.687 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1318 PE=4 SV=1 ; EVALUE=2e-34 ; Q/S_length_ratio=0.543" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|L0DR85|L0DR85_SINAD ; ALN/Q_length_ratio=0.858 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7453 PE=4 SV=1 ; EVALUE=2e-34 ; Q/S_length_ratio=0.658" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|L0D9E1|L0D9E1_SINAD ; ALN/Q_length_ratio=0.832 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0869 PE=4 SV=1 ; EVALUE=3e-34 ; Q/S_length_ratio=0.815" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|L0DQ81|L0DQ81_SINAD ; ALN/Q_length_ratio=0.545 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7511 PE=4 SV=1 ; EVALUE=4e-34 ; Q/S_length_ratio=0.455" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L0D6V6|L0D6V6_SINAD ; ALN/Q_length_ratio=0.656 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0102 PE=4 SV=1 ; EVALUE=1e-33 ; Q/S_length_ratio=0.702" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|L0DPR4|L0DPR4_SINAD ; ALN/Q_length_ratio=0.774 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6601 PE=4 SV=1 ; EVALUE=3e-33 ; Q/S_length_ratio=0.649" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|L0DHB8|L0DHB8_SINAD ; ALN/Q_length_ratio=0.667 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3834 PE=4 SV=1 ; EVALUE=3e-33 ; Q/S_length_ratio=0.709" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|A0A090KPX2|A0A090KPX2_9BACT ; ALN/Q_length_ratio=0.819 ; DESCRIPTION=Uncultured bacterium genome assembly Metasoil_fosmids_resub OS=uncultured bacterium PE=4 SV=1 ; EVALUE=2e-32 ; Q/S_length_ratio=0.339" /note="Pfam_scan:hit_1 (40..107); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:68; HMM_Length:71; EVALUE:2.4e-08; BITSCORE: 33.4" /note="Pfam_scan:hit_2 (130..182); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:48; HMM_Length:54; EVALUE:1.3e-10; BITSCORE: 40.5" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MLRRFVHLLT ATISEVGEVP DADLVRQFTQ DRNAAAFELL VRRHADTVWA PCRRLLRSDA 61 DAEDAFQATF LVLARKAGAI RGACVGAWLH QVAVRVALKL RAKTARILTA TSEHLSTLLA 121 SGMPDPDVPG IVHEELARLP DRYRLPVVLC DLEGRTHVEA AAALRCPVGT VAGRLSRARA 181 ILRDRLVRRG VAPVLVLSAS VAPVSVVRAA AALAGGSSGV SPVVSSLTEG VLCAMRTPTL 241 KWKLVAGLLG LAGAAITAYG SLPSAQTPMP PTALPSPEEP PKKAEPGQKA KSTEELVKDA 301 KARFAEFERL RLLLIEAELL NERRDIYVAG MPGKEDEAAL TKKVAELEQK IEALKPRQKY 361 YADLFGISPS SKLPEGIKKA KEEMTKLETP KSP //