LOCUS VTR91310.1 1169 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana dna polymerase iii subunit alpha : DNA-directed DNA polymerase OS=Rhodopirellula baltica (strain SH1) GN=dnaE PE=4 SV=1: PHP: DNA_pol3_alpha: HHH_6: tRNA_anti-codon protein. ACCESSION LR593886-611 PROTEIN_ID VTR91310.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_64040" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|L7CC63|L7CC63_RHOBT ; ALN/Q_length_ratio=0.997 ; DESCRIPTION=DNA-directed DNA polymerase OS=Rhodopirellula baltica SWK14 GN=RBSWK_04646 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.975" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|M2AT75|M2AT75_9PLAN ; ALN/Q_length_ratio=0.997 ; DESCRIPTION=DNA-directed DNA polymerase OS=Rhodopirellula europaea 6C GN=RE6C_06055 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.975" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|A3ZMH5|A3ZMH5_9PLAN ; ALN/Q_length_ratio=0.993 ; DESCRIPTION=DNA-directed DNA polymerase OS=Blastopirellula marina DSM 3645 GN=DSM3645_00500 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.990" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|E8QWL9|E8QWL9_ISOPI ; ALN/Q_length_ratio=1.032 ; DESCRIPTION=DNA-directed DNA polymerase OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_1325 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.940" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|L0DA50|L0DA50_SINAD ; ALN/Q_length_ratio=0.998 ; DESCRIPTION=DNA-directed DNA polymerase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1355 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.969" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|A6CCN9|A6CCN9_9PLAN ; ALN/Q_length_ratio=0.974 ; DESCRIPTION=DNA-directed DNA polymerase OS=Planctomyces maris DSM 8797 GN=PM8797T_32215 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.013" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|K5DA76|K5DA76_RHOBT ; ALN/Q_length_ratio=0.997 ; DESCRIPTION=DNA-directed DNA polymerase OS=Rhodopirellula baltica SH28 GN=RBSH_05333 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.975" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|M5RJ37|M5RJ37_9PLAN ; ALN/Q_length_ratio=0.994 ; DESCRIPTION=DNA-directed DNA polymerase OS=Rhodopirellula maiorica SM1 GN=RMSM_03872 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.981" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|D2R3M9|D2R3M9_PIRSD ; ALN/Q_length_ratio=0.953 ; DESCRIPTION=DNA-directed DNA polymerase OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_2313 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.981" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|M5TUS5|M5TUS5_9PLAN ; ALN/Q_length_ratio=0.997 ; DESCRIPTION=DNA-directed DNA polymerase OS=Rhodopirellula sallentina SM41 GN=RSSM_05777 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.976" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|M5SLV1|M5SLV1_9PLAN ; ALN/Q_length_ratio=0.997 ; DESCRIPTION=DNA-directed DNA polymerase OS=Rhodopirellula europaea SH398 GN=RESH_02216 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.975" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|F0SRK7|F0SRK7_PLABD ; ALN/Q_length_ratio=0.949 ; DESCRIPTION=DNA-directed DNA polymerase OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_1519 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.997" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|D5SUP7|D5SUP7_PLAL2 ; ALN/Q_length_ratio=0.926 ; DESCRIPTION=DNA-directed DNA polymerase OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_1265 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.994" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|M5SUZ5|M5SUZ5_9PLAN ; ALN/Q_length_ratio=0.997 ; DESCRIPTION=DNA-directed DNA polymerase OS=Rhodopirellula sp. SWK7 GN=RRSWK_06716 PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.976" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|Q7UUS6|Q7UUS6_RHOBA ; ALN/Q_length_ratio=0.997 ; DESCRIPTION=DNA-directed DNA polymerase OS=Rhodopirellula baltica (strain SH1) GN=dnaE PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.975" /note="Pfam_scan:hit_1 (6..194); Pfam:PF02811.14:PHP; Pfam_type:Family;HMM_aln_Length:168; HMM_Length:175; EVALUE:2.1e-47; BITSCORE: 161.1" /note="Pfam_scan:hit_2 (300..736); Pfam:PF07733.7:DNA_pol3_alpha; Pfam_type:Family;HMM_aln_Length:423; HMM_Length:426; EVALUE:3.6e-158; BITSCORE: 526.4" /note="Pfam_scan:hit_3 (812..901); Pfam:PF14579.1:HHH_6; Pfam_type:Domain;HMM_aln_Length:85; HMM_Length:90; EVALUE:1.3e-23; BITSCORE: 82.8" /note="Pfam_scan:hit_4 (998..1085); Pfam:PF01336.20:tRNA_anti-codon; Pfam_type:Domain;HMM_aln_Length:61; HMM_Length:75; EVALUE:1.3e-05; BITSCORE: 24.9" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0016779" /note="GO_domain:GO:0004518" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0006259" /note="GO_domain:GO:0005622" /note="Enzyme_Code:EC:3.1" /note="Enzyme_Code:EC:2.7.7.7" BEGIN 1 MARCFCHLHL HTHYSMLDGF NRIQPLVKQT KELGMNAVAI TDHGNLYGAI EFYMECKKGG 61 IKPIIGYEAY LAPGSRLDRD SKGELGFSTH LTLLAKNEAG LKNLIKLSSI AYLEGFYRNP 121 RIDKEILEEY HEGIMCLSGC LAGEFNQYII KDKPHEAEKT AKWFRKVFGE DFYIEIQNNG 181 IGLQDQCTPV AADIANKLGV PLVATADAHY LCSEDAQAHD VLFCINTRQM HDPRKKKYPE 241 ERMANPYFVR SPEDMYRLFP NHQDAVARSQ EIADKVNIDI DFKKRYFPVF VTPDEKTPDA 301 YLRELCEQGM YERYGAEPSE AVRKRLDHEL GIINKMGFST YFLVVWDFVR FAREEGIPCT 361 ARGSGCGAIV CYLLYMSHVC PIEYDLLFER FLDPNRSEAP DIDIDFCQER RELVIDYVKR 421 KYGTESVAQI GTFGTLAAKA ALKDVGRVLG QAPERMNALC KLVPMKGAIA KSLQEALDES 481 PDFKREYDQD PAIKQVVDIA LKLEGANRNV GTHAAGVVIA NGPVTNYVPV QRPPKKGDDN 541 SGDTTTMTTQ WEMGILEKVG LLKMDFLGLR NLTVLDNCVK LIQKTRKVTV EPTKFPLTDP 601 DTYKLLQRGD AKGVFQLESE GIRELLKRMK PDNIRDLIAV LALYRPGPIE GGMVDEYVEC 661 KNGRKKPEYP HPIVEEVLTE TYGVMVYQEQ IMRMLNRMGG IELAKAYACI KAISKKNFEI 721 INARKADFVA GATQRDMSAE KAEEIFDLIV KFGGYGFNKS HTAAYAQIGF QTAYLKTHYT 781 AEYMAALLSS EIDDGNKRDV FIDHISDARK LGIDVLPPDV NRGMADFDVQ HNRIIFGLTA 841 IKGVGRGAAL EVVRARTEGG KFKDLFDFCE RVDRRILAKA AAECMIQAGA FDVFGKRSAQ 901 FASVAKAYAV ADQRAAEKRK GQTGLFDDVE EEANSGPTAQ GLLDTDEWSE TERLKREKEV 961 LGFYISSHPL AQHDEQLRRF RTHDCVMLTK GSKNGTEARI GGMITNLDVR TANKGRNIGK 1021 KYAMFRIEDF TDSVRCILWS DEYSRFRDQI NSDTVAIFEG VLNWAPDRAE PDFAIKKIIT 1081 LDEARAEFTK SMVLKLAYTE DDETLRKLEA VSLILKRNRG QCPVYMSVRD PNGKQVQLKF 1141 NDDFRINPAS IKLEELEMLL GQGAIIFSR //