LOCUS VTR91183.1 241 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana rna polymerase sigma-e factor-like protein : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1390 PE=4 SV=1: Sigma70_r4_2 protein. ACCESSION LR593886-484 PROTEIN_ID VTR91183.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_65310" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DAB2|L0DAB2_SINAD ; ALN/Q_length_ratio=0.772 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1390 PE=4 SV=1 ; EVALUE=5e-53 ; Q/S_length_ratio=1.255" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|D2R9C0|D2R9C0_PIRSD ; ALN/Q_length_ratio=0.755 ; DESCRIPTION=RNA polymerase, sigma-24 subunit, ECF subfamily OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_3005 PE=4 SV=1 ; EVALUE=8e-49 ; Q/S_length_ratio=1.255" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|E8QXI6|E8QXI6_ISOPI ; ALN/Q_length_ratio=0.772 ; DESCRIPTION=RNA polymerase, sigma-24 subunit, ECF subfamily OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_2461 PE=4 SV=1 ; EVALUE=3e-48 ; Q/S_length_ratio=1.262" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|F0SLL7|F0SLL7_PLABD ; ALN/Q_length_ratio=0.776 ; DESCRIPTION=RNA polymerase, sigma-24 subunit, ECF subfamily OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_0070 PE=4 SV=1 ; EVALUE=6e-47 ; Q/S_length_ratio=1.262" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|A6C164|A6C164_9PLAN ; ALN/Q_length_ratio=0.751 ; DESCRIPTION=Uncharacterized protein OS=Planctomyces maris DSM 8797 GN=PM8797T_05780 PE=4 SV=1 ; EVALUE=4e-44 ; Q/S_length_ratio=1.296" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|A4A2W5|A4A2W5_9PLAN ; ALN/Q_length_ratio=0.784 ; DESCRIPTION=RNA polymerase sigma-E factor-like protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_17956 PE=4 SV=1 ; EVALUE=2e-41 ; Q/S_length_ratio=1.249" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|D5SQH8|D5SQH8_PLAL2 ; ALN/Q_length_ratio=0.788 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_2616 PE=4 SV=1 ; EVALUE=1e-38 ; Q/S_length_ratio=1.223" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|Q7UR06|Q7UR06_RHOBA ; ALN/Q_length_ratio=0.842 ; DESCRIPTION=Similar to RNA polymerase sigma-E factor OS=Rhodopirellula baltica (strain SH1) GN=RB5968 PE=4 SV=1 ; EVALUE=3e-35 ; Q/S_length_ratio=1.164" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|F2AKT2|F2AKT2_RHOBT ; ALN/Q_length_ratio=0.842 ; DESCRIPTION=RNA polymerase sigma-E factor-like protein OS=Rhodopirellula baltica WH47 GN=RBWH47_01496 PE=4 SV=1 ; EVALUE=3e-35 ; Q/S_length_ratio=1.164" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|K5C755|K5C755_RHOBT ; ALN/Q_length_ratio=0.842 ; DESCRIPTION=RNA polymerase sigma-E factor-like protein OS=Rhodopirellula baltica SH28 GN=RBSH_06098 PE=4 SV=1 ; EVALUE=3e-35 ; Q/S_length_ratio=1.164" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|M2BAV0|M2BAV0_9PLAN ; ALN/Q_length_ratio=0.826 ; DESCRIPTION=RNA polymerase sigma-E factor-like protein OS=Rhodopirellula europaea 6C GN=RE6C_00431 PE=4 SV=1 ; EVALUE=3e-35 ; Q/S_length_ratio=1.164" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|L7CPZ4|L7CPZ4_RHOBT ; ALN/Q_length_ratio=0.842 ; DESCRIPTION=RNA polymerase sigma-E factor-like protein OS=Rhodopirellula baltica SWK14 GN=RBSWK_00072 PE=4 SV=1 ; EVALUE=9e-35 ; Q/S_length_ratio=1.164" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|M5S8L8|M5S8L8_9PLAN ; ALN/Q_length_ratio=0.826 ; DESCRIPTION=RNA polymerase sigma-E factor-like protein OS=Rhodopirellula europaea SH398 GN=RESH_01398 PE=4 SV=1 ; EVALUE=1e-34 ; Q/S_length_ratio=1.164" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|X0SNG1|X0SNG1_9ZZZZ ; ALN/Q_length_ratio=0.643 ; DESCRIPTION=Marine sediment metagenome DNA, contig: S01H1_L04231 OS=marine sediment metagenome GN=S01H1_11847 PE=4 SV=1 ; EVALUE=1e-33 ; Q/S_length_ratio=1.516" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|M5RB69|M5RB69_9PLAN ; ALN/Q_length_ratio=0.660 ; DESCRIPTION=RNA polymerase sigma-E factor-like protein OS=Rhodopirellula maiorica SM1 GN=RMSM_06445 PE=4 SV=1 ; EVALUE=1e-29 ; Q/S_length_ratio=1.516" /note="Pfam_scan:hit_1 (136..189); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:52; HMM_Length:54; EVALUE:2e-13; BITSCORE: 49.5" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MDADTPFTAV DRDLLKRCLN REPGSWNDFV DRFLSLIYHT IGYTAHLRSA RVGPEDVEDI 61 AAEVLLQIVA NNFKVLREFR KQSSLATYLA VVARRICVHE LVRRQKVKDA IKRGESRLAE 121 PEPDDAPAAQ KGMESLEEVE KLLRRLSGRE KEIVRLYYLE GRTYEEISTE TDVPVNTIGA 181 VLSRARKKLR ETASAGSSAM PDPRTVKVPK APPIATPKPP KAPKSKSKME PIPEHRTEAS 241 E //