LOCUS VTR91070.1 198 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana rna polymerase sigma factor sigw : RNA polymerase sigma factor SigW OS=Candidatus Entotheonella sp. TSY1 GN=ETSY1_42065 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2 protein. ACCESSION LR593886-371 PROTEIN_ID VTR91070.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_66440" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|W4L3Z8|W4L3Z8_9DELT ; ALN/Q_length_ratio=0.889 ; DESCRIPTION=RNA polymerase sigma factor SigW OS=Candidatus Entotheonella sp. TSY1 GN=ETSY1_42065 PE=4 SV=1 ; EVALUE=3e-57 ; Q/S_length_ratio=1.082" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|W4M2J2|W4M2J2_9DELT ; ALN/Q_length_ratio=0.889 ; DESCRIPTION=RNA polymerase sigma factor SigW OS=Candidatus Entotheonella sp. TSY2 GN=ETSY2_29125 PE=4 SV=1 ; EVALUE=2e-53 ; Q/S_length_ratio=1.082" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|A3ZXQ9|A3ZXQ9_9PLAN ; ALN/Q_length_ratio=0.874 ; DESCRIPTION=RNA polymerase sigma factor sigW OS=Blastopirellula marina DSM 3645 GN=DSM3645_07410 PE=4 SV=1 ; EVALUE=4e-52 ; Q/S_length_ratio=1.042" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|D5SRL3|D5SRL3_PLAL2 ; ALN/Q_length_ratio=0.864 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_0700 PE=4 SV=1 ; EVALUE=8e-52 ; Q/S_length_ratio=1.076" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|L0DN34|L0DN34_SINAD ; ALN/Q_length_ratio=0.894 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6587 PE=4 SV=1 ; EVALUE=1e-50 ; Q/S_length_ratio=0.880" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|E8R320|E8R320_ISOPI ; ALN/Q_length_ratio=0.929 ; DESCRIPTION=RNA polymerase, sigma-24 subunit, ECF subfamily OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_0935 PE=4 SV=1 ; EVALUE=3e-50 ; Q/S_length_ratio=0.783" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|D2R4A2|D2R4A2_PIRSD ; ALN/Q_length_ratio=0.884 ; DESCRIPTION=RNA polymerase, sigma-24 subunit, ECF subfamily OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_0563 PE=4 SV=1 ; EVALUE=5e-50 ; Q/S_length_ratio=1.048" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|F0SR24|F0SR24_PLABD ; ALN/Q_length_ratio=0.924 ; DESCRIPTION=RNA polymerase, sigma-24 subunit, ECF subfamily OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_3674 PE=4 SV=1 ; EVALUE=7e-47 ; Q/S_length_ratio=0.943" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|A6C3H6|A6C3H6_9PLAN ; ALN/Q_length_ratio=0.894 ; DESCRIPTION=RNA polymerase sigma factor sigW OS=Planctomyces maris DSM 8797 GN=PM8797T_26425 PE=4 SV=1 ; EVALUE=4e-44 ; Q/S_length_ratio=1.082" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|M5T3Q5|M5T3Q5_9PLAN ; ALN/Q_length_ratio=0.884 ; DESCRIPTION=RNA polymerase sigma factor sigW OS=Rhodopirellula sp. SWK7 GN=RRSWK_03495 PE=4 SV=1 ; EVALUE=1e-43 ; Q/S_length_ratio=0.733" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|M5RLC5|M5RLC5_9PLAN ; ALN/Q_length_ratio=0.914 ; DESCRIPTION=RNA polymerase sigma factor sigW OS=Rhodopirellula maiorica SM1 GN=RMSM_03078 PE=4 SV=1 ; EVALUE=4e-43 ; Q/S_length_ratio=0.839" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|M5TTN8|M5TTN8_9PLAN ; ALN/Q_length_ratio=0.854 ; DESCRIPTION=RNA polymerase sigma factor sigW OS=Rhodopirellula sallentina SM41 GN=RSSM_06080 PE=4 SV=1 ; EVALUE=6e-43 ; Q/S_length_ratio=0.710" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|L7CA32|L7CA32_RHOBT ; ALN/Q_length_ratio=0.894 ; DESCRIPTION=RNA polymerase sigma factor sigW OS=Rhodopirellula baltica SWK14 GN=RBSWK_05409 PE=4 SV=1 ; EVALUE=1e-42 ; Q/S_length_ratio=0.789" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|Q7UMI2|Q7UMI2_RHOBA ; ALN/Q_length_ratio=0.894 ; DESCRIPTION=RNA polymerase sigma factor sigW OS=Rhodopirellula baltica (strain SH1) GN=sigW PE=4 SV=1 ; EVALUE=1e-42 ; Q/S_length_ratio=0.789" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|F2ALY6|F2ALY6_RHOBT ; ALN/Q_length_ratio=0.894 ; DESCRIPTION=RNA polymerase sigma factor sigW OS=Rhodopirellula baltica WH47 GN=RBWH47_04787 PE=4 SV=1 ; EVALUE=1e-42 ; Q/S_length_ratio=0.789" /note="Pfam_scan:hit_1 (24..91); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:68; HMM_Length:71; EVALUE:1.5e-12; BITSCORE: 46.9" /note="Pfam_scan:hit_2 (120..173); Pfam:PF08281.7:Sigma70_r4_2; Pfam_type:Domain;HMM_aln_Length:51; HMM_Length:54; EVALUE:1.6e-09; BITSCORE: 37.1" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MSWTEITVLV EQAKTGDREA YGELVARFQS SVYAMALSRV RDPLEAQELA QDVFVHAMRK 61 LPQLRDPRCF AGWLRRITAR MAINRLTRRG PLFGADTEVL DAVEARTRTA EEQFAVGEAV 121 DQLKEGLAEL KPLDRQTLEA FYIRGRSLKQ IAREFAVPTG TVKRRLHVAR LRLKEVLEGI 181 DPSLAERFAT DGAELAAV //