LOCUS VTR90994.1 211 aa PRT BCT 03-FEB-2020 DEFINITION Gemmata massiliana rna polymerase ecf-type sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3813 PE=4 SV=1: Sigma70_r2 protein. ACCESSION LR593886-295 PROTEIN_ID VTR90994.1 SOURCE Gemmata massiliana ORGANISM Gemmata massiliana Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Gemmata. REFERENCE 1 AUTHORS CONSRTM Science for Life Laboratories JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution, Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden FEATURES Qualifiers source /organism="Gemmata massiliana" /chromosome="1" /isolate="Soil9" /mol_type="genomic DNA" /isolation_source="soil" /db_xref="taxon:1210884" protein /locus_tag="SOIL9_67200" /note="BLAST_uniprot:hit_1 ; ACCESSION=tr|L0DHA1|L0DHA1_SINAD ; ALN/Q_length_ratio=0.948 ; DESCRIPTION=RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3813 PE=4 SV=1 ; EVALUE=2e-51 ; Q/S_length_ratio=1.010" /note="BLAST_uniprot:hit_2 ; ACCESSION=tr|D2R7L6|D2R7L6_PIRSD ; ALN/Q_length_ratio=0.986 ; DESCRIPTION=RNA polymerase, sigma-24 subunit, ECF subfamily OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_2776 PE=4 SV=1 ; EVALUE=2e-50 ; Q/S_length_ratio=0.950" /note="BLAST_uniprot:hit_3 ; ACCESSION=tr|M5T7D3|M5T7D3_9PLAN ; ALN/Q_length_ratio=0.967 ; DESCRIPTION=RNA polymerase ECF-type sigma factor OS=Rhodopirellula sp. SWK7 GN=RRSWK_06026 PE=4 SV=1 ; EVALUE=9e-47 ; Q/S_length_ratio=0.934" /note="BLAST_uniprot:hit_4 ; ACCESSION=tr|M5U6Q5|M5U6Q5_9PLAN ; ALN/Q_length_ratio=1.009 ; DESCRIPTION=RNA polymerase ECF-type sigma factor OS=Rhodopirellula sallentina SM41 GN=RSSM_05012 PE=4 SV=1 ; EVALUE=1e-44 ; Q/S_length_ratio=0.917" /note="BLAST_uniprot:hit_5 ; ACCESSION=tr|A3ZM76|A3ZM76_9PLAN ; ALN/Q_length_ratio=0.986 ; DESCRIPTION=Probable RNA polymerase ECF-type sigma factor OS=Blastopirellula marina DSM 3645 GN=DSM3645_00330 PE=4 SV=1 ; EVALUE=7e-44 ; Q/S_length_ratio=0.981" /note="BLAST_uniprot:hit_6 ; ACCESSION=tr|A6C3Z6|A6C3Z6_9PLAN ; ALN/Q_length_ratio=0.919 ; DESCRIPTION=Probable RNA polymerase ECF-type sigma factor OS=Planctomyces maris DSM 8797 GN=PM8797T_11059 PE=4 SV=1 ; EVALUE=2e-42 ; Q/S_length_ratio=0.986" /note="BLAST_uniprot:hit_7 ; ACCESSION=tr|M2AW85|M2AW85_9PLAN ; ALN/Q_length_ratio=0.967 ; DESCRIPTION=RNA polymerase ECF-type sigma factor OS=Rhodopirellula europaea 6C GN=RE6C_05471 PE=4 SV=1 ; EVALUE=7e-42 ; Q/S_length_ratio=0.921" /note="BLAST_uniprot:hit_8 ; ACCESSION=tr|L7CMI6|L7CMI6_RHOBT ; ALN/Q_length_ratio=0.991 ; DESCRIPTION=RNA polymerase ECF-type sigma factor OS=Rhodopirellula baltica SWK14 GN=RBSWK_00612 PE=4 SV=1 ; EVALUE=2e-41 ; Q/S_length_ratio=0.921" /note="BLAST_uniprot:hit_10 ; ACCESSION=tr|M5RRC9|M5RRC9_9PLAN ; ALN/Q_length_ratio=0.981 ; DESCRIPTION=RNA polymerase, sigma-24 subunit, ECF subfamily OS=Rhodopirellula maiorica SM1 GN=RMSM_01305 PE=4 SV=1 ; EVALUE=3e-41 ; Q/S_length_ratio=0.981" /note="BLAST_uniprot:hit_9 ; ACCESSION=tr|M5S4U7|M5S4U7_9PLAN ; ALN/Q_length_ratio=0.967 ; DESCRIPTION=RNA polymerase ECF-type sigma factor OS=Rhodopirellula europaea SH398 GN=RESH_02770 PE=4 SV=1 ; EVALUE=3e-41 ; Q/S_length_ratio=0.921" /note="BLAST_uniprot:hit_11 ; ACCESSION=tr|F2B0L6|F2B0L6_RHOBT ; ALN/Q_length_ratio=0.967 ; DESCRIPTION=RNA polymerase ECF-type sigma factor OS=Rhodopirellula baltica WH47 GN=RBWH47_00116 PE=4 SV=1 ; EVALUE=3e-41 ; Q/S_length_ratio=0.921" /note="BLAST_uniprot:hit_12 ; ACCESSION=tr|K5CHQ2|K5CHQ2_RHOBT ; ALN/Q_length_ratio=0.967 ; DESCRIPTION=RNA polymerase ECF-type sigma factor OS=Rhodopirellula baltica SH28 GN=RBSH_01014 PE=4 SV=1 ; EVALUE=4e-41 ; Q/S_length_ratio=0.921" /note="BLAST_uniprot:hit_13 ; ACCESSION=tr|Q7USG2|Q7USG2_RHOBA ; ALN/Q_length_ratio=0.967 ; DESCRIPTION=Probable RNA polymerase ECF-type sigma factor OS=Rhodopirellula baltica (strain SH1) GN=RB4514 PE=4 SV=1 ; EVALUE=7e-41 ; Q/S_length_ratio=0.887" /note="BLAST_uniprot:hit_14 ; ACCESSION=tr|E8R1I2|E8R1I2_ISOPI ; ALN/Q_length_ratio=0.910 ; DESCRIPTION=RNA polymerase, sigma-24 subunit, ECF subfamily OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_1817 PE=4 SV=1 ; EVALUE=1e-38 ; Q/S_length_ratio=0.991" /note="BLAST_uniprot:hit_15 ; ACCESSION=tr|F0SQ88|F0SQ88_PLABD ; ALN/Q_length_ratio=0.882 ; DESCRIPTION=RNA polymerase, sigma-24 subunit, ECF subfamily OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_4696 PE=4 SV=1 ; EVALUE=4e-37 ; Q/S_length_ratio=1.088" /note="Pfam_scan:hit_1 (24..92); Pfam:PF04542.9:Sigma70_r2; Pfam_type:Domain;HMM_aln_Length:68; HMM_Length:71; EVALUE:9.6e-16; BITSCORE: 57.1" /note="GO_domain:GO:0003677" /note="GO_domain:GO:0001071" /note="GO_domain:GO:0000988" /note="GO_domain:GO:0034641" /note="GO_domain:GO:0009058" /note="GO_domain:GO:0043234" /note="GO_domain:GO:0005622" BEGIN 1 MTTESDRLLI NRVRKNDQTA WAELDKRYRG RLTAYVRRRL KDHASVEDVV QETFIGFSNS 61 LVNYDDKRDL QTWLFTIAAH KVTDQLRKMG RLRYQSGTDT EDEAMGQAPD DRQRGASTLA 121 RSAEQREREE DALGQALRDL VRDFQLKGEW AKVMALELLY VKGWGNAEVA ARLKRTEQDI 181 ANLKFQAKKR LHDHLVTAKL SPAVFPELQA E //