LOCUS RID72769.1 1007 aa PRT CON 13-SEP-2018 DEFINITION Brassica rapa hypothetical protein protein. ACCESSION CM010630-4975 PROTEIN_ID RID72769.1 SOURCE Brassica rapa (field mustard) ORGANISM Brassica rapa Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica. REFERENCE 1 (bases 1 to 25115505) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE WGS assembly of Brassica rapa FPsc JOURNAL Unpublished REFERENCE 2 (bases 1 to 25115505) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE Direct Submission JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell Drive, Walnut Creek, CA 94598, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Meraculous v. May_2013 Assembly Name :: Brassica_rapa_FPsc_v1.3 Genome Coverage :: 155x Sequencing Technology :: Illumina Hiseq ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Brassica rapa" /mol_type="genomic DNA" /cultivar="FPsc (B3)" /db_xref="taxon:3711" /chromosome="A3" protein /locus_tag="BRARA_C04647" /db_xref="Phytozome:Brara.C04647" intron_pos 100:2 (1/14) intron_pos 176:0 (2/14) intron_pos 249:0 (3/14) intron_pos 287:2 (4/14) intron_pos 320:2 (5/14) intron_pos 350:0 (6/14) intron_pos 426:2 (7/14) intron_pos 488:1 (8/14) intron_pos 555:0 (9/14) intron_pos 668:0 (10/14) intron_pos 702:0 (11/14) intron_pos 801:1 (12/14) intron_pos 851:0 (13/14) intron_pos 946:0 (14/14) BEGIN 1 MSSDKHSARF LNKLKMERVR TMLTHTYPYP HEHSRHAMIA VIMGCLFFIS SDNMHTLVEK 61 LDNNFKWWSM YACLLGFFYF FSSPFLGKTI QPSYSTFSRW HVAWILVAAL YHLPSFQSMG 121 LDLRMNLSLF LTIYTSSVVF LFVFHIVFIG FWHLGLVSRV ARRRPAILTI LQNCAVLSIA 181 CCIFYSHCGN RAILRQTPLE RRRSSNSTWL TKLVQIDELK DQVCSSWFAP VGSASDYPLL 241 SKWVIYGELA CNGSCPVTSD EISPIYSLWA TFIGLYIANY VVERSTGWAL AHPVSVNNYE 301 KLKKQQMKPN FLDMVPWYSG TSADLFKTVF DLLVSVTVFL GRFDMRMMQA AMTKTCDGDE 361 RKELLYDHFT DMDDFWFDFM ADTGDGGNSS YSVAKLLAQP FINVPLDDDL VSLQRGNVLL 421 IGGDLAYPNP SAFTYEKRLF CPFEYALQPP HWYKNDSISV EKPELPEGVS DLKHYDGPQC 481 FLIPGNHDWF DGLNTFMRYI CHKSWLGGWL MPQKKSYFAL QLPKGWWVFG LDLALHGDID 541 VYQFNFFSEL VKEKVGKDDG VIIITHEPNW LLDWYWKDDT GKNMRHLICA FLKGRCKLRM 601 AGDLHHYMRH SCTHQSDGPA AHVEHLLVNG CGGAFLHPTH VFSDFSKFYG ASYDSKYAYP 661 SFKDSSRIAL GNILKFRKKN WQFDFIGGII YFVLVFSLFP QCKLGHILRD DSFSGHLGSF 721 LGTVWSAFVY ITEQSYVSFT GVVMLLVAAI MFVPSKISRK RRMLIGVLHV AAHLTAALIL 781 MLLLELGIET CIQHKLLATS GYHTLYQWYK SVENEHFPDP TGLRVRIEQW TFGFYPACIK 841 YLMSAFDIPE VMAVTRTNIC REGMESLSRS GAAIYYASVF LYFWVFSTPV VSLVFGSYLY 901 ICINWLHIHF DEAFSSLRIA NYKSFTRFHI KSDGDLEVFT LGVDKVPKEW KLDKDWDSEP 961 RSTVKMSHLR RFPSKWCATT SQQDPINTVK IVDHFVISRS DKEVGGS //