LOCUS RID72071.1 1861 aa PRT CON 13-SEP-2018 DEFINITION Brassica rapa hypothetical protein protein. ACCESSION CM010630-4277 PROTEIN_ID RID72071.1 SOURCE Brassica rapa (field mustard) ORGANISM Brassica rapa Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica. REFERENCE 1 (bases 1 to 25115505) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE WGS assembly of Brassica rapa FPsc JOURNAL Unpublished REFERENCE 2 (bases 1 to 25115505) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE Direct Submission JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell Drive, Walnut Creek, CA 94598, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Meraculous v. May_2013 Assembly Name :: Brassica_rapa_FPsc_v1.3 Genome Coverage :: 155x Sequencing Technology :: Illumina Hiseq ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Brassica rapa" /mol_type="genomic DNA" /cultivar="FPsc (B3)" /db_xref="taxon:3711" /chromosome="A3" protein /locus_tag="BRARA_C03977" /db_xref="Phytozome:Brara.C03977" intron_pos 49:2 (1/20) intron_pos 68:0 (2/20) intron_pos 100:2 (3/20) intron_pos 537:0 (4/20) intron_pos 577:0 (5/20) intron_pos 643:0 (6/20) intron_pos 706:0 (7/20) intron_pos 733:0 (8/20) intron_pos 752:1 (9/20) intron_pos 922:0 (10/20) intron_pos 940:0 (11/20) intron_pos 955:1 (12/20) intron_pos 1020:0 (13/20) intron_pos 1038:0 (14/20) intron_pos 1065:0 (15/20) intron_pos 1111:0 (16/20) intron_pos 1150:0 (17/20) intron_pos 1183:2 (18/20) intron_pos 1252:2 (19/20) intron_pos 1377:0 (20/20) BEGIN 1 MHGSVSGYVL VNAEVDSMGG VIDSGGGGGG GIGLKTSPTA IEKAQAELRQ EYDVREERRR 61 ELEFLEKGGN PLDFKFGVAT SLSFQSTSLT DQQAEHFLNS EVKDSFAMTA SPHGDSAESS 121 GRPAVPTVSE PNTADNLLLF DSGNKSVEGE NNSKYPNRQN RTSESERSSK ANTNQNTKET 181 EDSAIFRPYA RRNRTKINRD PARSSSVDLI QNRGGLATSL SARRGSVDGK GFIPDAANQK 241 DKQTTSVSCP VFGNSNGTIV PTNVAPSNLL NTKVDGEPIV RESAAGSRTS LMKDGADITC 301 RKSSADLPFE EAEKKADLVL NSTEIGSPKA AAIAGQKNNY TQGDSTGEKE SLTDRGAAGT 361 KGLESSHANN LEVDVDTERD IYRVDKLDSD ESSVQKASRV EGLLNHTVGE LMIEDETGRS 421 TTITGECSPT REMDMNSVKI ENENYRSTPE LQNEEKYSDT ENDKKGGSVL ANNPSSSLHP 481 AIPQASVDAN SSVVGNNVLS GTDVEALKHQ PSSDEGSKVL DKVKEDSILE EARIIQLKRR 541 RIAELSCGTV PLEVREKCQW DFVLEEMAWL ANDFAQERLW KMTAAAQICH RVALTSQLRL 601 EKQIQYRKLK NIASILSNAV LEFWSSVEVP RELEETNLGN DKETCQESNC DTGRKSFAPG 661 VREYACRFLK YNNSSVPYHS AASSTPDYMC DSELLDVSLV DQLTEESLFY SVPSGAMKVY 721 QISIETHLAR CEKYGNSMKE EVDTSGYDAA GDIEYDVTAF DEDEGETSAY YLPRAFECSK 781 SFNLSHKKRK NLMKSHSARS YDLGADYVNY TGGSNSSNLM AKRPGSNINA GSVPTRVRTA 841 SRPRIVGSFG YATAGSLPVP SKTDASSGDT SSFQDEQSSL PGGSAFQKGT EVESSGTFEK 901 QLPYDMAETS GKPKKKKKIH LGSAYDQTWH LDSSVHAEQK DHWKKRPENH FDTNGLYGHH 961 AKKQKTTKQL VENNFDGAMG LTGSIPSPAA SQMSNMSNSN KSIKFIGSRD RARKIKGLKI 1021 SSSQHGSGTT WSLFEDQALV VLVHDMGPNW ELISDAMNST LKIKCIYRNP IECKERHKIL 1081 MDKTASDGAD SAEDSGTSQS YPSTLPGIPK GSARQLFQRL QGPMEEDTLK SHFEKICLIG 1141 KKLHCRKTQN DGRDSKQIVP VHNSQVMALS QVFPNNLNGG VLTPLDLCDA STSGQDLFSL 1201 ESPGSHLGLP MLNQGTPVLP TSGATPSTSG SSGVVPGNNL PTTPGLHSAT PRDGRFNVPR 1261 GSLPLDEQHR LQRHNQISGN NLQQNSLSTH GAVSGLGHRV VPGVNTVGVS GTNRGTPMSR 1321 SGFQGIGSPA VPNNVSMLSS GMVGIPNTGN INSGRGASPR NSMVRPPREA VQHMMRAAQG 1381 NSQGIPAFGS LSSGFTNNQT TSVQSYPGHV SQQHQMPQQS HVLGNSHNPP LQSPGLSHAT 1441 GAQQDGFALR QRQMHQRYMQ QQQVAASNTT VPHGQQQSQG TSVSPPQQCP QTQPPVSPQP 1501 LPIPPVSTSP NSAMAQQNPQ KSQLPLHGLG RNPQSGAPGI NNQSGKQRQR QHQQQSGRQH 1561 PHQRQPTQGQ QPSKQSKGMG RGNMIHQNIT VDQSHLNGFT MPPSSQGTEK GEAVVPVRSD 1621 QRLPKTFPGA TSPSQQQQVQ LPSDDCIQGQ SSPAVSSPSI SPAVAPSNHQ HLLLHQKQRQ 1681 VQPTAQRIVH QNHLGNSDSS RKSQADFVPR VPQSVTNTTS SMSTSKGMPQ VSDDSKKVKA 1741 VGSTAVPSPN ALEPPTNAAS VQSAAPKVVN SSNTDSACSN PVTSPNQGLA QKHLPAGVPC 1801 QELKGVIQRQ PSLPSVEQRR PKLPEQLTVQ NQKHLASDDQ PPQLEEAQKL PSPKPPETKV 1861 E //