LOCUS RID71527.1 1812 aa PRT CON 13-SEP-2018 DEFINITION Brassica rapa hypothetical protein protein. ACCESSION CM010630-3734 PROTEIN_ID RID71527.1 SOURCE Brassica rapa (field mustard) ORGANISM Brassica rapa Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica. REFERENCE 1 (bases 1 to 25115505) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE WGS assembly of Brassica rapa FPsc JOURNAL Unpublished REFERENCE 2 (bases 1 to 25115505) AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K., Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S., Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S., Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B., Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T., Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S., Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B., Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T., Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H., Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M., Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K., Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S., Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E., Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N., Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R., Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M., Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A., Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R., Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y., Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T., Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R., Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J. TITLE Direct Submission JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell Drive, Walnut Creek, CA 94598, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Meraculous v. May_2013 Assembly Name :: Brassica_rapa_FPsc_v1.3 Genome Coverage :: 155x Sequencing Technology :: Illumina Hiseq ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Brassica rapa" /mol_type="genomic DNA" /cultivar="FPsc (B3)" /db_xref="taxon:3711" /chromosome="A3" protein /locus_tag="BRARA_C03461" /db_xref="Phytozome:Brara.C03461" intron_pos 54:2 (1/34) intron_pos 89:0 (2/34) intron_pos 126:2 (3/34) intron_pos 167:2 (4/34) intron_pos 201:2 (5/34) intron_pos 257:0 (6/34) intron_pos 296:0 (7/34) intron_pos 322:2 (8/34) intron_pos 356:2 (9/34) intron_pos 427:0 (10/34) intron_pos 505:0 (11/34) intron_pos 547:2 (12/34) intron_pos 587:0 (13/34) intron_pos 660:0 (14/34) intron_pos 713:0 (15/34) intron_pos 738:2 (16/34) intron_pos 808:1 (17/34) intron_pos 877:2 (18/34) intron_pos 904:1 (19/34) intron_pos 943:2 (20/34) intron_pos 1000:2 (21/34) intron_pos 1057:0 (22/34) intron_pos 1071:2 (23/34) intron_pos 1086:0 (24/34) intron_pos 1134:2 (25/34) intron_pos 1166:1 (26/34) intron_pos 1463:0 (27/34) intron_pos 1557:0 (28/34) intron_pos 1589:0 (29/34) intron_pos 1648:2 (30/34) intron_pos 1676:0 (31/34) intron_pos 1717:2 (32/34) intron_pos 1748:2 (33/34) intron_pos 1800:0 (34/34) BEGIN 1 MHLFNGWLPP PVAEETKKEK ESFARVVRCV KELHRPDDPE SVYATLKWIS VIELYVRAKS 61 DLAVEDVTEL VEIGLQIFHS SQDKLYAQVR WGNVLVRLMN KYRKKLSLKV EWRPLYDTLI 121 HAHFSRSPGP EGWRLRQRHF EAVTSLTRSC RRFFPQGAAA DIWSEFMSLL ENPWHNSSFE 181 GSGFVRLFLP TNPENQDFFS EKWINNCLEL WDSIPNCQFW NSQWAAVLAR VIKNCSSIDW 241 ESYLPMLFSR FLNMFEVPVA NGSGSYPFSV DVPRNTRFLF PNRTMTPSKS IAQSIILFQV 301 YFLKPGSTAH EQFKKLVNLL EQYYHPSNGG RWTYSLERFL LHLVVAFQKR LQREQQNPDS 361 LSKVCLGKPE RIAFVEVVLK LIDRGQYSKN EHLSETVAAA TSILSYVEPS LVLPFVASRF 421 HLALETTTAT HQLKTAMMSV AFAGRSILQS SMSTAKQELG GDMDDSVFLD LIGISLSNAL 481 LGMDANDPPK TLATMQLIGS IFSNMAVLDD SSDDISIMTM ASFSEWLDEF LCRLIALLQH 541 LEPNSVINEG LSSSATSGTF LVEDGPYYYC MLEILLGRLS GSLYSQALKK ISKFVRTNIL 601 PGAIAEVGLL CCACVHSNPE EAVVQIVEPM ILAVISSLKD TPVTGFGGKG SADTLGSNKK 661 DKQTLSPALE AAIDYQLKVL SVTITYAGSS LLRYKDHFIE AISSAFNSSS WKVNGAGDHL 721 LRSLLGSLIL YYPMDQYKCL SRHPAAPALE EWISTKASSK DEQVAHSRWH VPTKEEIQFA 781 NELLDLHLQS ALDDLLRICQ SNIHSDAGDE KTHLKVTLLR IDSTLQGVLS CLPDFRPSPK 841 HDMFEELPFF IAGASGSSVG SAEIRERTAE TIHAACKYLL EKKSDDSILL VLIIRIMDAL 901 GNYGSLEYDE WYNHRQAWKL ESAAIVEPPA NFITEFHSKG KRRPRWALID KAYMHNTWRS 961 SQSSYHLFRT DGNFSPPASL TLLVDDLLTL CLHNYETVRV IAGKSLLKLL KRWPPLLSKC 1021 VRSLSENLRN PDAPENVVLG SCGILSSQSV LKHLTTDPKS FSSFLLGILS SSHHESMKSQ 1081 KAIIELFVKY NIHFAGLSRN ILRSLDSHVE GSTSGDLVSQ ISSMSFDSSS LHWRYNLMAN 1141 RVLLLLAMSC RMDPAFSFKI LNETAGHFLK NLKSQLPQTR ILAISALNTL LKESPHKMQG 1201 KDQPPVSSQE NANSSLDLAL SQIFQEEGFF KETFESLSHI HITDTDSSSR GNHGSSSFQS 1261 MADKSITRFY FEFSASWPRT PSWISLLGSD IFYPSFARIF KRLAQECGVP VLLALKSPLE 1321 EFCNAKERPK QCVAAETLAG LLHSDVNGLQ SEWDSWIMVQ LQNVILGQSV ESIPEWATCI 1381 RYAVTGKGKQ GTKIPMMRQQ ILDCIVAPLP PTATTTVVSK RYAFLSAALI ELSPPKMPVS 1441 EVKLHIALLD ELIRNMSHSS AQIREAIGVI LSVLCSNIRL RMSYQQKHPS EEGRTDVDSQ 1501 LKEENWFKLI SARASEAVTN IQQASISDSM DTSADVDMEN AQSNGDSLDD VKWMETLFHF 1561 IISSFKSGRS SFLGDVIAGF LYPVISLQET SHKDLSTLAK AAFELLKWRV FPGSHLQKVI 1621 EVILSSADDS NWRIRSSTLT YLRTFMYRHT FILAHEEKQK IWKTVEKLLV DSQVEVREHA 1681 AAVLAGLMKG GDEDFAADFR DRSYAEANSI QRKRNRRKSS STQSIAAVHG AVLGLVASVL 1741 SVPYDMPSWL PDHVTLLARF AGEPTPVKST VTKAVAEFRR THADTWNIQK DSFTEEQLEV 1801 LADTSSSSSY FA //