LOCUS       BDN81003.1               347 aa    PRT              BCT 09-FEB-2023
DEFINITION  Mycobacterium pseudoshottsii DNA-directed RNA polymerase
            subunit alpha protein.
ACCESSION   AP026367-1218
PROTEIN_ID  BDN81003.1
SOURCE      Mycobacterium pseudoshottsii
  ORGANISM  Mycobacterium pseudoshottsii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (bases 1 to 6051062)
  AUTHORS   Komine,T., Fukano,H. and Wada,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JUN-2022)
            Contact:Takeshi Komine
            Nippon Veterinary and Life Science University, School of
            Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
            Japan
REFERENCE   2  
  AUTHORS   Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
            Kurata,O. and Wada,S.
  TITLE     Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
            pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
            Japanese Sardine (Sardinops melanostictus) in Japan
  JOURNAL   Microbiol Resour Announc 11 (12), e00785-22 (2022)
  REMARK    Publication Status: Online-Only
            DOI:10.1128/mra.00785-22
COMMENT     Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Flye v. 2.9; galaxy v. 0
            Genome Coverage       :: 189x
            Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2019-07-10"
                     /db_xref="taxon:265949"
                     /geo_loc_name="Japan:Tokyo"
                     /host="Sardinops melanostictus"
                     /isolation_source="liver of Japanese sardine"
                     /mol_type="genomic DNA"
                     /organism="Mycobacterium pseudoshottsii"
                     /strain="NJB1907-Z4"
     protein         /gene="rpoA"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:UniProtKB:P9WGZ1"
                     /locus_tag="NJB1907Z4_C12180"
                     /transl_table=11
BEGIN
        1 MLISQRPTLS EEVLTDSRSQ FVIEPLEPGF GYTLGNSLRR TLLSSIPGAA VTSIRIDGVL
       61 HEFTTVPGVK EDVTDIILNL KALVVSSEED EPVTMYLRKQ GPGEVTAGDI VPPAGVTVHN
      121 PNMRIATLND KGKLEVELVV ERGRGYVPAV QNRASGAEIG RIPVDSIYSP VLKVTYKVDA
      181 TRVEQRTDFD KLILDVEAKN SITPRDALAS AGKTLVELFG LARELNVEAE GIEIGPSPAE
      241 ADHIASFALP IDDLDLTVRS YNCLKREGVH TVGELVSRTE SDLLDIRNFG QKSIDEVKVK
      301 LHQLGLSLKD SPPSFDPSEV AGYDVATGTW STEGAYDDQD YAETEQL
//