LOCUS       BDN80117.1               873 aa    PRT              BCT 09-FEB-2023
DEFINITION  Mycobacterium pseudoshottsii DNA topoisomerase 1 protein.
ACCESSION   AP026367-332
PROTEIN_ID  BDN80117.1
SOURCE      Mycobacterium pseudoshottsii
  ORGANISM  Mycobacterium pseudoshottsii
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            ulcerans group.
REFERENCE   1  (bases 1 to 6051062)
  AUTHORS   Komine,T., Fukano,H. and Wada,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JUN-2022)
            Contact:Takeshi Komine
            Nippon Veterinary and Life Science University, School of
            Veterinary Medicine; Kyohnan-cho 1-7-1, Musashino, Tokyo 180-8602,
            Japan
REFERENCE   2  
  AUTHORS   Komine,T., Fukano,H., Yoshida,M., Inohana,M., Hoshino,Y.,
            Kurata,O. and Wada,S.
  TITLE     Complete Genome and Partial Megaplasmid Sequences of Mycobacterium
            pseudoshottsii Strain NJB1907-Z4, Isolated from an Aquarium-Reared
            Japanese Sardine (Sardinops melanostictus) in Japan
  JOURNAL   Microbiol Resour Announc 11 (12), e00785-22 (2022)
  REMARK    Publication Status: Online-Only
            DOI:10.1128/mra.00785-22
COMMENT     Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Flye v. 2.9; galaxy v. 0
            Genome Coverage       :: 189x
            Sequencing Technology :: Pacbio sequel; Illumina HiSeqX
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2019-07-10"
                     /db_xref="taxon:265949"
                     /geo_loc_name="Japan:Tokyo"
                     /host="Sardinops melanostictus"
                     /isolation_source="liver of Japanese sardine"
                     /mol_type="genomic DNA"
                     /organism="Mycobacterium pseudoshottsii"
                     /strain="NJB1907-Z4"
     protein         /gene="topA"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:UniProtKB:P0A621"
                     /locus_tag="NJB1907Z4_C03320"
                     /transl_table=11
BEGIN
        1 MPAKFKSEPW ARLGVNVDAD FEPLYIISPE KKSAVSELKD LLKDVDELYL ATDGDREGEA
       61 IAWHLLETLK PRVPVKRMVF HEITEPAILE AAENPRDLDM DLVDAQETRR ILDRLYGYEV
      121 SPVLWKKVAP KLSAGRVQSV ATRMIVQRER DRMAFRSASY WDIVATLDAS VSDPKAAPPT
      181 FVARLTSVDG LRVATGRDFD SLGTLRKADE VTVLDEARAA ALATGLHGAQ LSVASVEEKP
      241 YSRRPYPPFM TSTLQQEAGR KLRFSGERTM SIAQRLYENG YITYMRTDST TLSESAINAA
      301 RTQARQLYGE EYVASSPRQY TRKVKNAQEA HEAIRPAGET FATPDAVRRE LDGDEFRLYE
      361 LIWQRTVASQ MADARGTTLS LRIGGSAGEQ QVVFSASGRT LTFPGFLKAY VETVDELVGG
      421 EADDAERRLP NLTPGQRLDA VELTPDGHTT NPPARYTEAS LVKAFEELGI GRPSTYTPII
      481 KTIQDRGYVH KKGSALVPSW VAFAVTGLLE QHFGHLVDYG FTAAMEDELD AIASGQERRT
      541 DWLNNFYFGG DHGVSDSVAR AGGLKKLVGV NLEGIDARKV NSIKLFDDEQ GSPIYVRVGK
      601 NGPYLERTIT GEDGEPTPQR ANLNDSLTPD ELTLVLAEEL FATPQEGRVL GIDPESGHEI
      661 VAKDGRYGPY VTEILPEPPA PEAGTEAPAK KSKKATGPKP RSGSLLRSMD LQTITLEDAL
      721 KLLSLPRVVG TDPASGEEIT AQNGRYGPYL KRGTDSRSLA TEDQIFSITL DEALKIYAEP
      781 KRSGRQSASA PPLRELGTDA ASGKPMVIKD GRFGPYVTDG ETNASLRKGD EVASITDERA
      841 SELLADRRAR GPVKRAAKKT TRKSPAKKAV KRA
//