LOCUS       BDC78977.1               275 aa    PRT              VRL 23-NOV-2021
DEFINITION  Severe acute respiratory syndrome coronavirus 2 ORF3a
            protein protein.
ACCESSION   BS001271-4
PROTEIN_ID  BDC78977.1
SOURCE      Severe acute respiratory syndrome coronavirus 2
  ORGANISM  Severe acute respiratory syndrome coronavirus 2
            Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
            Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae;
            Betacoronavirus; Sarbecovirus; Betacoronavirus pandemicum.
REFERENCE   1  (bases 1 to 29810)
  AUTHORS   
  CONSRTM   Japan COVID-19 Open Data Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2021)
            Contact:Hiroshi Mori
            National Institute of Genetics; 1111 Yata, Mishima, Shizuoka
            411-8540, Japan
            URL    :https://www.ddbj.nig.ac.jp/sars-cov-2
REFERENCE   2  
  AUTHORS   Nagaoka,H., Arita,Y., Ishigami,K., Mori,H., Tanizawa,Y., Asano,S.,
            Fujisawa,T., Arita,M., Kurokawa,K., Mitsunaga,S., Toyoda,A. and
            Inoue,I.
  TITLE     Whole-genome sequencing test of SARS-CoV-2 variants from Shizuoka
            samples.
  JOURNAL   Unpublished
COMMENT     The genome was sequenced and analyzed under the collaboration
            between Shizuoka Institute of Environment and Hygiene, National
            Institute of Genetics, and Shizuoka Prefecture.
            
            ##Assembly-Data-START##
            Assembly Method       :: META_VRL_LONG v. 1.0.0
            Coverage              :: 1301x
            Sequencing Technology :: Nanopore GridION
            ##Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2021-06-14"
                     /db_xref="taxon:2697049"
                     /geo_loc_name="Japan:Shizuoka, east"
                     /host="Homo sapiens, male"
                     /isolate="hCoV-19/Japan/SZ-NIG-Y21436/2021"
                     /isolation_source="nasopharyngeal swab"
                     /mol_type="genomic RNA"
                     /organism="Severe acute respiratory syndrome coronavirus
                     2"
     protein         /gene="ORF3a"
                     /transl_table=1
BEGIN
        1 MDLFMRIFTI GTVTLKQGEI KDATPSDFVR ATATIPIQAS LPFGWLIVGV ALLAVFQSAS
       61 KIITLKKRWQ LALSKGVHFV CNLLLLFVTV YSHLLLVAAG LEAPFLYLYA LVYFLQSINF
      121 VRIIMRLWLC WKCRSKNPLL YDANYFLCWH TNCYDYCIPY NSVTSSIVIT SGDGTTSPIS
      181 EHDYQIGGYT EKWESGVKDC VVLHSYFTSD YYQLYSTQLS TDTCVEHVTF FIYNKIVDEP
      241 EEHVQIHTID GSSGVVNPVM EPIYDEPTTT TSVPL
//