LOCUS       BDC78829.1               419 aa    PRT              VRL 23-NOV-2021
DEFINITION  Severe acute respiratory syndrome coronavirus 2 nucleocapsid
            phosphoprotein protein.
ACCESSION   BS001258-11
PROTEIN_ID  BDC78829.1
SOURCE      Severe acute respiratory syndrome coronavirus 2
  ORGANISM  Severe acute respiratory syndrome coronavirus 2
            Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
            Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae;
            Betacoronavirus; Sarbecovirus; Betacoronavirus pandemicum.
REFERENCE   1  (bases 1 to 29757)
  AUTHORS   
  CONSRTM   Japan COVID-19 Open Data Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2021)
            Contact:Hiroshi Mori
            National Institute of Genetics; 1111 Yata, Mishima, Shizuoka
            411-8540, Japan
            URL    :https://www.ddbj.nig.ac.jp/sars-cov-2
REFERENCE   2  
  AUTHORS   Nagaoka,H., Arita,Y., Ishigami,K., Mori,H., Tanizawa,Y., Asano,S.,
            Fujisawa,T., Arita,M., Kurokawa,K., Mitsunaga,S., Toyoda,A. and
            Inoue,I.
  TITLE     Whole-genome sequencing test of SARS-CoV-2 variants from Shizuoka
            samples.
  JOURNAL   Unpublished
COMMENT     The genome was sequenced and analyzed under the collaboration
            between Shizuoka Institute of Environment and Hygiene, National
            Institute of Genetics, and Shizuoka Prefecture.
            
            ##Assembly-Data-START##
            Assembly Method       :: META_VRL_LONG v. 1.0.0
            Coverage              :: 1664x
            Sequencing Technology :: Nanopore GridION
            ##Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2021-06-04"
                     /db_xref="taxon:2697049"
                     /geo_loc_name="Japan:Shizuoka, west"
                     /host="Homo sapiens, female"
                     /isolate="hCoV-19/Japan/SZ-NIG-Y21418/2021"
                     /isolation_source="saliva"
                     /mol_type="genomic RNA"
                     /organism="Severe acute respiratory syndrome coronavirus
                     2"
     protein         /gene="N"
                     /transl_table=1
BEGIN
        1 MSLNGPQNQR NAPRITFGGP SDSTGSNQNG ERSGARSKQR RPQGLPNNTA SWFTALTQHG
       61 KEDLKFPRGQ GVPINTNSSP DDQIGYYRRA TRRIRGGDGK MKDLSPRWYF YYLGTGPEAG
      121 LPYGANKDGI IWVATEGALN TPKDHIGTRN PANNAAIVLQ LPQGTTLPKG FYAEGSRGGS
      181 QASSRSSSRS RNSSRNSTPG SSKRTSPARM AGNGGDAALA LLLLDRLNQL ESKMFGKGQQ
      241 QQGQTVTKKS AAEASKKPRQ KRTATKAYNV TQAFGRRGPE QTQGNFGDQE LIRQGTDYKH
      301 WPQIAQFAPS ASAFFGMSRI GMEVTPSGTW LTYTGAIKLD DKDPNFKDQV ILLNKHIDAY
      361 KTFPPTEPKK DKKKKADETQ ALPQRQKKQQ TVTLLPAADL DDFSKQLQQS MSSADSTQA
//