LOCUS       BAD31069.1               559 aa    PRT              PLN 16-FEB-2008
DEFINITION  Oryza sativa Japonica Group putative actin interacting
            protein protein.
ACCESSION   AP005179-2
PROTEIN_ID  BAD31069.1
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 127992)
  AUTHORS   Sasaki,T., Matsumoto,T. and Katayose,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-MAY-2002)
            Contact:Takuji Sasaki
            National Institute of Agrobiological Sciences, Rice Genome
            Research Program; Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, Japan
            URL    :http://rgp.dna.affrc.go.jp/
REFERENCE   2  
  AUTHORS   Sasaki,T., Matsumoto,T. and Katayose,Y.
  TITLE     Oryza sativa nipponbare(GA3) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0084L07
  JOURNAL   Published Only in Database(2002)
COMMENT     Genes were predicted from the integrated results of the following:
            GENSCAN (http://CCR-081.mit.edu/GENSCAN.html), FGENESH
            (http://www.softberry.com/), GeneMark.hmm
            (http://opal.biology.gatech.edu/GeneMark/), GlimmerM
            (http://www.tigr.org/tdb/glimmerm/glmr_form.html), RiceHMM
            (http://rgp.dna.affrc.go.jp/RiceHMM/), SplicePredictor
            (http://bioinformatics.iastate.edu/cgi-bin/sp.cgi), sim4
            (http://globin.cse.psu.edu/html/docs/sim4.html), gap2
            (http://www.tigr.org/software/glimmerm/), BLASTN and BLASTX. The
            genomic sequence was searched against NCBI NonRedundant Protein
            database, nr (ftp://ncbi.nlm.nih.gov/blast/db) and the cDNA
            sequence database at RGP or DDBJ. Protein homologies of the coding
            regions were searched against NCBI NonRedundant Protein database
            with BLASTP. ESTs represent the identified cDNA sequences using
            BLASTN with the corresponding DDBJ accession no. and RGP clone ID.
            Full-length cDNAs represent the identified cDNA sequences using
            BLASTN with the corresponding DDBJ accession no.
            
            A gene with identity or significant homology to a protein is
            classified based on the protein name to indicate the homology
            level such as same name, 'putative-' and '-like protein'.  A gene
            without significant homology to any protein but with full-length
            cDNA or EST homology (covering almost the entire length of partial
            sequence) is classified as an 'unknown' protein. A gene predicted
            by two or more gene prediction programs is classified as a
            'hypothetical' protein according to IRGSP standard. A gene
            predicted by a single gene prediction program is also classified
            as a probable 'hypothetical' protein and is included as a
            miscellaneous feature of the sequence.
            
            The orientation of the sequence is from M13rev to -21M13 of the
            BAC clone. This sequence of OSJNBb0084L07 clone has an overlap
            with P0506C07 (DDBJ: AP004384) clone at 5' end and with
            OSJNBb0002L09 (DDBJ: AP005877) at 3' end.  Detailed information on
            overlap and assembly quality together with annotation of this
            entry is available at http://rgp.dna.affrc.go.jp/GenomeSeq.html
FEATURES             Qualifiers
     source          /chromosome="7"
                     /clone="OSJNBb0084L07"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="genomic DNA"
                     /organism="Oryza sativa Japonica Group"
     protein         /gene="OSJNBb0084L07.2"
                     /note="contains EST(s): C91636(E31135),AU029603(E31135)"
     intron_pos      27:1 (1/14)
     intron_pos      147:0 (2/14)
     intron_pos      181:0 (3/14)
     intron_pos      197:0 (4/14)
     intron_pos      220:2 (5/14)
     intron_pos      260:1 (6/14)
     intron_pos      292:1 (7/14)
     intron_pos      329:0 (8/14)
     intron_pos      356:0 (9/14)
     intron_pos      389:2 (10/14)
     intron_pos      426:0 (11/14)
     intron_pos      461:1 (12/14)
     intron_pos      490:0 (13/14)
     intron_pos      532:0 (14/14)
BEGIN
        1 MARRAAAGLL RRHLGPLAAG ETLQARGMYP KQYGAANHAF SRFYSIQGQQ RSLYGFRTNV
       61 ETDDTQQSAR MNFEVQKRSF SSAAAHVQRN PAYSVLNSDD VSYFKSILGD SGVVQDEDRV
      121 SVANMDWMGK YKGSSQLLLL PKSTAEVSKI LSYCNSRRLA VVPQGGNTGL VGGSVPVYDE
      181 VIISLGGMDK IITFDNVNGI LTCEAGCVLE NLSSYVENKG FIMPLDLGAK GSCHIGGNIS
      241 TNAGGLRFIR YGSLHGSVLG LEVVLADGTV LDMLTTLRKD NTGYDLKHLF IGSEGSLGIV
      301 TKIAILTPAK LPSTNVAFLS CNDYISCQKL LLAARRSLGE ILSAFEFMDR HCINLAMKYL
      361 EGVHNPLPVS PFNFYVLIET TGSDESYDKA KLEAFLLRSM EDGLVADGVI AQDISQASNF
      421 WRIREGISEA SVKVGAVYKY DLSIPVEKLY DIVEEMRSRV GDMGQVLGYG HLGDGNLHLN
      481 ILSTKYSDKM LAQIEPFVYE WTSKQRGSIS AEHGLGLMKA EKIHYSKSSE AVQLMASIKK
      541 LLDPNSILNP YKVLPQSVL
//