LOCUS AMU96576.1 547 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 FAD-linked oxidase protein. ACCESSION CP013342-3612 PROTEIN_ID AMU96576.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_18415" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_013500414.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTEQAGYYGK RRKWHSWGYE DEVISQAEVK EMAVRVGKRL GIDEPVVLSD PTLEEIELRE 61 SRISIPASLS SFCNSDKWDR VSHSYGKSFK DLTRIFRRDF TNPPDVIAYP RNEAEVAAVL 121 DWCGDNGYAA IPYGGGSSVT DGFTAPEDCD GSVIIDLGNM NQVLEVDPVS RCALIQAGTL 181 GPSLEDQLKP HGLTLRHIPQ SWEFSSLGGW IATRSSGHYA THLTHIDDMV QSLRVVTPRG 241 TIENRRLPGS GAGPDPDRLF IGSEGSLGII TQAWMKLQGR VVFRANATIT FDTFYQGAAA 301 IRQITQAGLF PANCRYLDAQ DAQFYGAGDG TKSVLLLGFE SADHPVDVWL ERGVEICQDH 361 GGEVVTKTGS GGDALKSSRS GAQGNWREQF RYLPRLMHTR AAMGVVSFTF ETAYTWDKFE 421 AVDTEIIRRV SEAQKALTGG GIVCRRFSFL YPDGPAPYYS VVAPSTHETS LEHYQALSDV 481 ASDAISELGA TITHHHAVGR SFRPWYDKEV DPLFRDMLAG AKNAVDPDWI MNPGMLLDRS 541 NHLKIVG //