LOCUS AMU96524.1 800 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 chemotaxis protein CheA protein. ACCESSION CP013342-3559 PROTEIN_ID AMU96524.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_18140" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003050266.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MDDLLNDFLA ETSEILADAG GALVVWEADP ADRAQLDSIF RMMHTIKGSS GFLALPRVTA 61 LSHAAEEALD QVRRGHRAPD AALVTGVLAI VDRLSMLCER LASEGAEPAG EDGDVIAALS 121 AGAPDPVQAD AAPAVPEAIR IRREDDIITE LQGWRSIRVP LPLLDSVMTG VTDIVLARNE 181 FARMLRESGA DAALIGAFDR LSDSIAGMRQ SVSQMRMQRI DKLFAPLPRI VRDLAQELGK 241 KIHFDTSGGE VELDREMMEN IRDPLIHIVR NAIDHGIEGL DERVAAGKDI TATIRVSARQ 301 SGNQIEIEVS DDGRGLSPDA LVAKAIANRL LSAADARTLT PAEKLELIFR PGFSTAAQIT 361 EISGRGVGMD IVKANVEKIG GLVELRNEEG RGLSVLLRVP MTLTIISGLM VRAAGQYFAI 421 PRGSVREILL ETNDSVRIER LGGGEIATVR GEQFPLLRLE DVLARQRGDD DDVDDRALVI 481 IRPGQGQSYA LSVAAIHDHE ELVIKPAAPM IMATGLYAGT TLPDNGRPVL LLDVQGLLAA 541 SGVDAGEAGR SQDRADEREA QAERARNATQ LLLFREADGR TRGVRLSVIE RVEEVPQSAL 601 FESGGAVRVQ VGDGIFPVHA ATVPAGEAAV KLLRLYDGDT VICYPIAAVI DIVRLPDVVE 661 PASAPGLIAG VVLVGGEPVE LIDPFWIMEC HAGGRTAVAG RAPLCRLAGD ADGWGENFLA 721 PLLRGAGYRV ATAADAGEGA DVMLCLTESG QGCAHDGGDL PVICLRSAAV SASPEDASVY 781 RYDRAGLLAA LRRKVGGARS //