LOCUS AMU96037.1 1078 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 amidohydrolase protein. ACCESSION CP013342-3068 PROTEIN_ID AMU96037.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_15625" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003044043.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MARIALALAA TLACSTSVFA QQAATPAADA KPEKWDVNAP PGMVTHKVPI AVDEGSWMNI 61 DVAPDGKTIA FDLLGDIYTM PIAGGTPTRI AEGLAYEHQP RFSPDGKRIA FVSDRGGGDN 121 IWIMNRDGSD KRQLSKEEFR LLNQPSWSPD GEFIVAKKHF TTGRSLGTGE VWLYHVSGGA 181 GVPLVKRPNE RHQKELGEPI FAPDGKHVYY TRNVTPGPIF EYAQDSNTDL FHIERYNLDT 241 GEVDTAASGD GGAVRPTPSP DGKKLAFVRR EGAQSKLYVK DLTSGAEKKV YDALDQDVQE 301 TWAVTGVYPN MAWTPDSGEI LFWAGGKLRR VAPGGGDARI IPFQIDDDRV IIDATHPVVK 361 VAPDSFQTQM PRWAEVSPDG KQVVFETLGK LWVKPATGGT ARRLTADKSA AFELWPSWSS 421 DGKQIVFVRW TDAGLGEIHT IAAGGGASRK VTSVPGHYAE PRYSPDGKLI AFERRSGGGL 481 TSQRWGDDPG IYSVAATGGA PVRITDSGAK PQFGTDSDRI FMVASGDGKN QLVSTDLNGQ 541 DKRVHASGDL VSDYEISPDG RTLAFRENHD AYVTPLMPGG QDVSLSTKSG ALPVTRISGS 601 GADYMHWSDG GRRLHWTRGA TLFSADLGAM FADAPGDDRA VKFTPPTEGV SLSMTQAAAK 661 HKGVVVITGA KIVTMATKDG GIIDNGAIVI DGDRIVSVGP AGAVTVPAGA VTVDATSKTI 721 VPGFVDAHAH GPHGDDELVP QQNWSEMVNL AMGTTTSHNP SSRASEIFVS SEMQRAGLIL 781 APRIFSTGEI IYGAKAAGIY AEIDGYEDAL AHVRRLKAQG AHSVKNYNQP RREQRQMVVK 841 AAQAENMAVV PEGGSLYTMD LTLIQDGNTT VEHNIPLHTF YKDLVQLWGQ TKTDYTPTLV 901 VTYGGPAGDP YWRAHTNVWE QPILARHIPP AILAADNKRR VIAPESDYVD DDSAREAGKI 961 AAVGRNVSIG AHGQQAGVGA HWEIWSFVRG GWSNIDALRA ATIMPATALG YAKDVGSLEA 1021 GKLADLLILD ADPTENIRNT EQIHRVMLGG RLYDPMTLNE AETGNRKRDP YWWEADRP //