LOCUS AMU95988.1 785 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 hypothetical protein protein. ACCESSION CP013342-3019 PROTEIN_ID AMU95988.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_15365" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003051766.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTGEKKIVGL WRESAANREN EQPAQTDAPA SEAASALEAE VPVEREWLDM TPVATDDDDM 61 PDPQSGAWRD RLMPTLLVII GLGWCLFALF TATKGFARPV ALDQWPALVA TLSMPLVLLT 121 LLWMALLRSS RSEQARFARL AAALRHENDA LAQSMAVLGE KLGEAQRQLS EQARNVQQLG 181 VDAVLRLNDS SDKLATNASV IANAHDQLAR SGDVAMQRMD GLLAGLPRID DVAQRLAVNF 241 REAGLVAHQQ GANLEAKLAE LGEEAAKAAR TGEAAAAGLH EALGALQQQT QETESGLIAA 301 ASQVTDAHGV ALAQITQSSA SIRDTLQTTV DNLGARLDTT WQQYRDRVDA AADQMDARLA 361 SAEAAGAALG DQLAAHGTAS EELAARITAH VTETRQQLEV LDVSVSASTG VIGRAIDDTK 421 AQLGAFIADV QTGNNSAHQL ITHAESLLLA LDAVTRELDE TLPHALDRMA LHGKATQGAL 481 GQIKPLLEAS ELVAQSTLSH VNAVKSTLQA NETKMAEHGE SQQALTDRVN AALADADAAL 541 ARLRAGADDF ADQGGARMIA TLAEVKSTAE SAADEARQTL ERLVGNARDA MQATATEAID 601 AAFKTEVTAQ LKAVEDASQR AVEAANGAAD RLMRQLITIM DTSASVEQRV AEAEQAIAAS 661 DRDSLAKQVG ILTEALKSSA IDITKVMSSE VSDAAWDAYL KGDRGIFARR AVKLLDNSET 721 KEILRLYQND DGFHAAVNQF IHDFEAMLRL LIGARDGSAI SVTLLSSDIG KLYVALAQAI 781 DRLRS //