LOCUS AMU95927.1 572 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 hypothetical protein protein. ACCESSION CP013342-2958 PROTEIN_ID AMU95927.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_15040" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003051438.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTRKFARFGG AAMAGALLVL AACSAEKTPQ SAGSAANWTE FRDQFLAGYF PLNPNFAVYQ 61 GKHEFDGQLP DWSAAGLQKQ IAFLEKTIAD AQAFDGKMSD AEKFERDYLV HVAQGQLFFL 121 KDADFPHKNP AFYVGQLDPN VYISRPYADP ATRMKAFISY AEKVPAAAAQ IKANLKLPMP 181 ATFVKYGSAG FGGFADYYTG DAKAAFADVK DPALQKQFDE VAAKAAAAMK DLAAYVASQP 241 GSADGWALGA DKFSKMLLTN EAVDTPLDEL ERIGQADLKR NQDALKAACA TYAAGMTIAD 301 CMKKMGSDKP ADGPVAEARR QLPMLRAFLV EKDLVSIPGT EQAQVEESPP YNRQNSAYID 361 IPGPYEKGLP SVYYISPPDP SWDKQTQLDF VPGKKDLLFT SVHEVWPGHF LNFLHSNRAE 421 SIFGKLFVGY AFAEGWAHYT EEMMWDAGLG DGDPETHIGQ LSNALLRNCR YLSAIGLHTK 481 GMTVADSEKL FKEQCYQDEG NARQQAARGT YDPLYLNYTM GKLMIRKLRE DWTKGDKTKW 541 KAFHDEFLSY GGPPIPMVRA AMMKEASPKA VF //