LOCUS AMU95865.1 1052 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 hypothetical protein protein. ACCESSION CP013342-2896 PROTEIN_ID AMU95865.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_14725" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003040475.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MNKSHLLMGV AAFAVAISAS QPTFAQETST NCADTDDNGV CDKDEASTPA NDGGAIIVTG 61 SRIARANFDT VEPSVVVSSA DIEARGFETL GQALNEQPSF GVPGSSPVGG QSGFGQGQSF 121 VNFLGLGSQR TLTLVNGRRF VGSNTASIFG PTGAGSQVDL NVIPTKLIER VETIAVGGAP 181 IYGSDAISGT INVILKQDYQ GLEIDGQYGL TTRGDAANYR FRALAGYNFA DGRGNITLSG 241 EYNKGEGLTG VDRPLFASGL FFRNASDPSR GFSQQLYADR RLPSISESGT PIVGLADYGL 301 DFNFPDYQGP LFGLPAGFNG AVSNGAGDQL RFDENGNLIP INFGTYAGRP GSFGIDFAGG 361 NGFSLVPTSN LLSETRRYSG IATTKYQLSD SVRFFGEAWY SNSKGRNLRD QPVYNSALFD 421 AAGTPDGNII VSINNPFLSD AARAAIQNSI DNNPFSDQNF LGVTQNYFYL GRANTDLATG 481 NSTGEVEVMR FVAGFDGSFD ALAGTWNWEV VGNYGRSKTS GYSRELVQQN FENAVDAVLD 541 GSGNIVCRPG YTNATIQTVS STCAPLNLFG TGRISQEALD YVSAIARPVS LNKQKVFSAS 601 LSGPLFRLPG GDFSIAVGYE HREESQNFDP GAYFRGELQS DGTYASYGRS VPIQPVIGKF 661 NTDEVSGEIR AELISPSTGT FINLLEVQAA GRWVDHSIAG GDFTWTLGGR VKPIEDFTIR 721 GNFTRSIRAP AITEAFNPSS DFFGFADDPC DEANVNNGPD PATRAANCAA LGLPGDFSSL 781 SSSRSFKQAI AGNPSLNNEK ANSWTVGVVL EPSFIPRFRA SVDYVDIKLK DVISELSGDQ 841 VVANCYDSAD FPSNEFCDRV TRNPFVGDGS QNDGQITFIE TGYFNSAQLR YKGYLAAIDY 901 RLPVPAISSD GQIGINLSYQ YLDELSTRAD ANSAKSRTDG SIGYSKHKGV LTINYSEPAF 961 NLFTQLSYIG KAKIDTQVPD DYYPDGLNNI PSVIFVNMGV NFNVDERFEF QVNVDNVFDK 1021 QPPYPYPASG GTITYFRGLL GRYVRAGATV KF //