LOCUS AMU95650.1 778 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 hypothetical protein protein. ACCESSION CP013342-2681 PROTEIN_ID AMU95650.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_13630" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003044722.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MASEKKRHEL NGFGVDARGR WGLLSASLLS LACAHAVAAQ EREPAAPPAA EAATAEPAAA 61 DTPPPGDDTP IASPSPPPEG AVLPEVAPII PDDEFRKAIP PISAEDDPEL DKPLESIADF 121 EKRVADAAKQ KANGTADAVP QVDGTPVPAL ADGQTVEPIG DAPITDTELA APLPPLESFD 181 VQPVQFVDAE PEGENRQVAY SVQVNGLAAA DDSTDADLSG LFGDLSALYD GDGKADNFAM 241 LRARLSNDAE LMQRILSSEG YYDGSVDTRI DRAGRERGQP VSAVIDVKPG PRYSFSDIIL 301 DAKPTVPPGL IADNFPLAIG EPIVAERVQG AEAAISLKLP EEGYPFAKVG QRDILLDGDK 361 ATGVYTLPIN IGPRARFGGF ASSGEEAFGA DHVAIMARFK RGDLYDSRKV DDLRQALVAT 421 GLFATVSVEP QATGESAGDD TEYVTMLVNQ QAGPPRTLAA SAGYGTGEGI RVEGSWTHRN 481 LFPPEGALIV RGVAGTQEQG LGVTFRRSNA GRRDRTFELV GEATRSNYNA FEALTGRIAA 541 RVSYDSTPIW QKKLTYAYGV QLIATSEDDY SFLLADRERD LYYIVGLTGQ IGIDRTNSLL 601 DPTKGFRVTT LIEPEGSMSG RFSPYARARV DVSGYYPVAE NIVLAGRVRV GSILGAARER 661 LAPSRRFYAG GGGSVRGFGY QQLGPKDPNN DPIGGRSVNE AAFEARYRFG NFGIVGFVDA 721 GQVYTGSTPD FSNLRFGAGI GGRFYTNFGP MRLDVATPID RKPGESRISV YVSIGQAF //