LOCUS AMU95484.1 684 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 peptidase protein. ACCESSION CP013342-2515 PROTEIN_ID AMU95484.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_12780" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003047307.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTRYRPISFA AAALAGAALL APPALAEEGM WTFDAFPAQQ VKQTYGWAPD QAWLGKVQAA 61 AVRLTGGCSA SFVSAEGLIL TNHHCVASCL FDNSKAGADY LNDGYVADRR DMELKCPGQQ 121 AEVVTSIGDV TGALKAAMGS LAGEALTKAR DAKIAEIEKS GCPDTDKTRC QVVTLFGGGQ 181 YKLYKYRKYS DVRLAWAPED RAATFGGDPD NFNFPRYSLD ASFLRAYENG KPVATPAHLQ 241 WNPRAPREGE MTFVVGNPGS TSRLYTTSQL AFERELRLPI TVTTYSELRG RLLRAMEESK 301 DHEREGLDLL NGLENSLKVY IGRQKALNDP AFTATLVAKE DELKEKSAGN AAIGDPWSSV 361 DKAVGAYRSL YLPARFTNPM SDLYGYAETL VYAAQERSKP NSERLPGYTD SALPLTKKSL 421 LDAKPVYPWL DELTLEWSLS KAREYLGADD PDTKLLLGQE SPEQLAKRLV EGSKLADPAY 481 RQILWDGGLA AIEASDDPMI RFALRLAPRQ RALKKAVDEA YGGPLAVAGG KIADARFAAY 541 GDTLYPDATF TLRISYGQVK GWMERGNAVP IATTMGGTFD RATGNPPFDL APAFAAKKAA 601 IDPAVTYDFV TTNDIIGGNS GSPVIDRAGT VIGAAFDGNI HSLGGNYGYD GTLNRTVVVS 661 TAAVQEALET IYPAPALMKE LAGK //