LOCUS AMU95214.1 500 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 acetyl-CoA acetyltransferase protein. ACCESSION CP013342-2243 PROTEIN_ID AMU95214.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_11415" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003052767.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTMTDPERIP VIIGVGQVND RPADPDEGLD SLGLMVAALR VAAEDAGVPL AEIDSLAIVD 61 QISFHSLGKL PEPLAAAIGA SPAINYQSAA PHGDTPVRLL NEAANRIGAG EVKLAAIVGA 121 EALRTAAGRA AKAASGEDKS YNAIRKVATR HEPDYAQKHG LAAPVDVYPL YENATRAAWG 181 QSLAEAQDES AEIWSRFSEV AAENEGAWIR KPATPADILR VDERNRPIAF PYSKLMVANS 241 SVNQGAGFLV ASLAEARRRG IPEDRLIYVG MGAAAKEPPS ILRRDRYNGS VSMETSINRT 301 LALNGMTAQD FDFVELYSCF PCVPKMARRT LGWPVDRPAT VFGGLTFGGG PIANYMSHAI 361 VSMVDKLRRD GRYGFLFANG GFATDNHCIV LGKEPIAAAS FPQDFDYQAE AEAKRGPVPD 421 LVEDYTGPAT IESYTIFYGR DGAPRAGVVV ARTPAGERTL AHVDVEDATM LAILTDGKAE 481 PVGAAGQIVA LDEGFGWRAG //