LOCUS AMU95194.1 793 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 hypothetical protein protein. ACCESSION CP013342-2223 PROTEIN_ID AMU95194.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_11315" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_013080072.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MGSRWNLRWA LLATAAAQLT PATAFAQSAP DEAAAAAPGD EIVVTARKRE ESLQDVPISV 61 QAFSSAALER AGIKDFSEVA YRVPGLKLSA ERAVDTELFI RGIGSDIQGA GADAAVGIFV 121 DGAYLSRGTG SLLDLYDLER VEVLKGPQAL RFGKSVVGGL INYVTKKPGD TFEGRFEATY 181 GNYNRLDVAG SVRGPVSDTL SLGLVASSRS HDGYAKNLRG GDEEDQNMQS VRAQLRWRPT 241 PSLDVNLAAD YTRHRDGARW VDILIPGDSE EVTYLSYYAP TIDSLPGFVL PDRNAPFKSA 301 DPRSGNHNFT GFQNSDMYGV SGTIDWQAGG GLSVTSQTVY RDSSLKARED GSGMLFNFPI 361 DPATNAPDIT SAMVAGLDTY LATVPDSYFD SGKGEDVTQF SQELRLRWDN GGPLRVEGGA 421 YYLHENIRRA EDVNFLFPDY QAIEEFAFAM AYGGTPATPS PGSNHTVTTS RNDNVGVFGE 481 LSYSITDKLT FEAGLRYAYD HKRYSNNRSG VSFEGEAVNF VVGETRSWDA WLPSATLRFE 541 PSNDVTLYAR YAKGYKPGGW TGEDANTPAE ALVSFDPETA NSFEVGAKLA LAGRRLFINA 601 AAYHTNYDNL QTNQFLSPGP GMPPDNFVFN AKNGTRAYGL ELDFQARITD AFTLSGNYAY 661 SRCNFTGELI IDDEGTDLDG NTCRRTPKHA FNVAANLDQP IADNLVLVLG SDFQYTGANF 721 FDNPNTPILK FDSEILLNAR IGLRDADDKW EVTAWAKNLT NELNFTSKLE LFGTIYSTYI 781 PPRTYGVTAR FRF //