LOCUS       AMU94501.1               918 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 bifunctional
            uridylyltransferase/uridylyl-removing protein protein.
ACCESSION   CP013342-1524
PROTEIN_ID  AMU94501.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_07765"
                     /EC_number="2.7.7.59"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003042285.1"
                     /note="catalyzes the uridylylation or deuridylylation of
                     the PII nitrogen regulatory protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /transl_table=11
BEGIN
        1 MSDIFSDLPH RRAIIDRRLL ADRLDAIAAE TADAGKRRGA MVALLKEALE EGRAEIARRL
       61 LDHPSSGRVA AQATAFLIDQ IVRLSYDFTV DYLYPASNRS AGERITVIAV GGYGRAEMAP
      121 FSDVDIGFLT PFKQTSWTEQ VIEAQLYTLW DLGLKVGHSS RSLDEMVRTA KDDLTIRTAL
      181 LEARFIWGER ALYDQAAARF DAEVMAGNAR AFVAEKLAER DERHKRMGDS RYVVEPNVKE
      241 GKGGLRDLHT LFWIGKFIHR VRTVPELVDA GLLSARELRQ FSRAENFLLA VRCHLHILAG
      301 RAEDRLTFDF QREIAARMQF ADRPGKSPVE RFMQLYFLHA KSVGDLTGTF LAHLDEQLAA
      361 RGRRFLPTLR RRPGRLNGFV LDRGRLALPS DDYFREDPVR LLEIFQLADK YGLEIHPQAM
      421 RQARHDAKMI DGKVRRIARA NALFLDVLTS PRDPETVLRW MNEAGVFGRF VPDFGRVVAQ
      481 MQFDMYHHYT VDEHTIRAIG LLSDIEQNRL KDDHPLSTAI MDQIHSRRVI YVAVLLHDIA
      541 KGRGGDHSVL GAELALRVCP RLGLNEAETE TVSWLVRHHL LMSATAFKRD LADFKTILDF
      601 AQLVQSPERL RLLLVLTVVD IRAVGPGVWN SWKRQLLTEL YDAAEEVLRL GHKQRGREVR
      661 IATKKEEAQA LLQMGDKDFG KLAKRLPESY WIAEPVEVIA ANLIHIQKSS GAPLHIAAVP
      721 DDDRGATLVM VLAADHPGLF YRIAGGIHLA GGNIIDARIH TTRDGLALDN FLVQDPLGRP
      781 FAEAEQIVRL TRAIEDALAN RHKLLPKLEA RALPRTRAEA FRIAPNVFID NKASNRFTVI
      841 EVNAQDRPAL LNQLAYALFQ SKVTVHSAHV ATYGERAVDT FYVTDLIGDK IDSAARVKSL
      901 EKRLLEAAAS RSEEAVAA
//