LOCUS AMU94269.1 648 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 iron permease protein. ACCESSION CP013342-1290 PROTEIN_ID AMU94269.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_06570" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003046463.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MPPARRFLSL LIALAAICGL VVPTAQARTD AGEVQTIWRL LDYVAVDYGG AVSNGAVTST 61 VEYAEMTEFS ATVRKGIEAL PVSPARARLV SEAGQLQTAI ASKADPGKVA GQARGLAADL 121 LAAYPVPLAP RNAPDPRRGA QVYLENCASC HGARGDGNGP QAKGLDPAPI DFTDAGRARK 181 RSLFALYQVI GQGLEGTSMP SFAHLPSDDR WAVAAYAGGF AFRDVAAGRR VWNQTPAARE 241 LVPDLQAFTS LSPEVLGRGL GSEQADALTA YLRSDPQALT TASPATLAVA RDKLAQSLAA 301 YRKGNRSEAE RLALSAYLDG FEPIEPILTT RDSALMAQIE SAMSDYRVSI ARGVPVDAVA 361 GKAAAVETLF ADAEAALSPD AASDASTFVG ALTILLREGL EALLIIVAMI AFLRKAERPE 421 VLPYVHGGWI AALAAGGATW AVATYAISIS GANRELTEGF GSLFAAVVLV WVGIWMHGKS 481 HAESWQRYIR EAMGKALSRR SAWFLFGLAF LVVYREVFET ILFFAALAAQ GSRSAIAAGA 541 GTAVVILAAI AWVMLRYSRV LPIGRFFAYS SSLIAILAVV LAGKGAGALQ EAGLLGITPL 601 AHFPRFPAMG IFPSLEPLLL QLLALAILWI GYRYNSRQHR RIETAPGR //