LOCUS AMU94103.1 713 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 acyl-peptide hydrolase protein. ACCESSION CP013342-1123 PROTEIN_ID AMU94103.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_05730" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003043161.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MRKLALLGAS LLTLAAQPLH AQQGAVSEPA SAPAATASAP DDATGSAQTG PQRRFTGEDL 61 FGLAAASDPQ ISPDGRHIAY VRRANDIMSD RAVSTIWLVD TQTGAEVPAA GRGGDAFSPR 121 WSPDGKRLAY ASTEGGSVQL WVRWMDGGEA VKLTGLPTSP SSITWSPDGR SIAYTMLVKD 181 DAPRFGKAPA NKPEGAKWAA PLEVHDLLTY RADGQGYIEP GFEKIFLVSA TGGAPRQLTF 241 GPYHDGGPLS WSRDGAMLYF SADRRPDWES DPLESNIYAL DVASGSISQL TTRKGPDANP 301 LVSPDGRMIA YLGFDDRLRA YENTGLYVMN RDGSNSRRIA PDWDFSVDGL AWDADGRGLY 361 AQYDEHGETK VARIGLDGSV RNVASGLTSS GLDRPYSGGS FSVADNDAIA FTGGGPARPA 421 EVELAAGGKT RVLTDLNRTL REVKALGEVR KITATSSVEG LSIDGWLTLP PGYREGQRVP 481 LILEIHGGPF AAYGPHFSTD NQLYAAAGYA VLSANPRGST SYGAAFANAI DKNYPGNDYF 541 DLMSIVDRAI DLGIADPDAL FVTGGSGGGV LTSWIVGKTD RFKAAVAQKP VINWTTQALT 601 ADGPAFFGRY WIGAMPWEDQ TPFWSHSPLS LVGNVKTPTM VVVGSEDYRT PVSESEQYYT 661 ALRLRGIPTV LVKVPGASHG GIAARPSQAA AKASAILAWF EKYKKGWTPA AKD //