LOCUS AMU93728.1 826 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 hypothetical protein protein. ACCESSION CP013342-742 PROTEIN_ID AMU93728.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_03800" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003627465.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MHLISEDGVM AQADARAFAM LMAPNRTARR LASADRTIAG AINRVATMRR RREAGVERAY 61 AIADRALQRE LAESIAPGWG RTFRVKLQSP PFKSASDCKI SRSKMAPSSA RPLRRYQTPL 121 IDARGRVALY MNVTYKGFKS KGWRSGLAAA HIEYIFRDGS LEEGDVQLAH PISNMGESVE 181 EIEAAWRMVE AVEEGYRANA KVQYRVVLNL PHGLSAGQRR SLVHEFCERA FGRLGLPYAA 241 ALHVPDELSD QRNVHAHIVF STRPCERTAS YQWDVAEEKV NGLTDKAGLF RLRALCAAHM 301 NQACRFAGLE TRFTHLSYQA RGLNAQRQER VGPERMAAFD RGETVAVIES NARIVKLNEL 361 GVATDRTAKK LVLAERETAL LARSVEIAAR RRNLDTQRDT LAELTRRIRA VAIPSRCRSL 421 SDVAIVREIA SRAASVRTAI RARVAYNVPM SRSANVQNIA ANVRRMTAQR ILLEARRTGI 481 DQAVTQLGAI SRRLDQNRQA TATSTAAAVN EAGRAVLLGA KVAPYQTGKL GLQLDTSRLD 541 AVEAGRVHAM DENARRAALS ERYRNDRRRA ADIAAAAAAA EAQQAQHQSA WIDFVAELRM 601 KRRYIAIKDG KPVWRPAMLG RHGLEPSAIL PAEFERDVQE ILQRQRSELS QISQYCRSAP 661 GGIRKVGDKW SVTESAPPQI RDLVRAWKEE PMVQAALERL AAAPSQPQNK PVAATLPSPA 721 PSNEMPAVTP DRSATGGAGI PGDGRPSAAE RSSSPPKPPQ SLSPYELMLV AAAEARAKHD 781 ARWRRSRRLD MPDPSNALGS PSERKHDLKE PRKSLRPFPP GLDFGR //