LOCUS       AMU93696.1               869 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 TonB-dependent
            receptor protein.
ACCESSION   CP013342-708
PROTEIN_ID  AMU93696.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_03625"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_017499974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTYNNTRKTA LFIAGSMIAL AAVPAGAQDA PATQDAATTD ETTSAGGLSD IVVTAQKRSQ
       61 NLQDVPAAIS AFSSEDLAAR GVSETSDLMG SLPNIQVTSA YSDTQPNFSL RGISVANEFS
      121 ASTASPVGVY VDEVYQSFRA SHGQQLYDLE RVEVLRGPQG TLYGRNTTGG AINFITRKPY
      181 LSGNNGYLTL GYGNYDTIKA EGAVELTLAE DKAGIRAAFT RSKGDGYTFN PTQNLDFGTT
      241 DSIAGRISLR FKPVDTIDIN LKAYYAKNDP RQDLPYGIGY LQGRTDAGGY SRFDPRPELG
      301 GRLLKRNEVQ SDTGGEYFTR SKGLSLNIEA ELGNDLTLTS ITGYDVGRYR LAPFDCDGSP
      361 NNICAIRYDS ASKSFNQDLR LTYDGDRLKL IGGLYYGQDK IDTHNEPDFF GFLRPILSGL
      421 GLPGNYGNIP IAVGNSLRTL PAFALDPSLT PTDPGFCAPV VINPAGYFDA RTLIAFNADV
      481 AATNTAGGTA AQNACFAAGA PPFGPIAGDQ RFTLKRPSTA IYGEAVWDVT DQLSITLGLR
      541 YTWDKVKYQN ARTVLFGLDG VTPIANLVPY SSPDDPNLPA LNQKESSGEL TGRLVVDYKF
      601 SDDVMGYASY SRGYRSGTYN GLAYQDVSQV YFLDPEKVNA YEVGLKTRLL DNKLQLNLAG
      661 FYYDYSNQQI AQIIGATSFL RAANGRVFGG EAELALQATD AIRFDASVGY LNSKYKGNKI
      721 DPTDPASLTR NINGNQFPNA PKWTASAGVD VTLVDSGPHK FQVRGDVQYM GKYFFDPFGS
      781 YGQNPCDKPA AGSLVLAATP EIACGNPDYV LFNARATYTF DERFSVALWG KNLTNKFYYT
      841 YGLNLNAFYL DYLARGAPRT YGVEATMRF
//