LOCUS AMU93589.1 497 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 flagellar protein FlaI protein. ACCESSION CP013342-601 PROTEIN_ID AMU93589.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_03080" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003040680.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSAFGRRPGT AGRPAFGVAK PMQAGPGMAG GAQFPAIDTP AAEAPPPPSN LSPEMEAMER 61 LNQRSTAEAM EPEKAQGFEA SVHKIKEQVL PRLLERVDPE AAATLSKDEL TEEFRPIILE 121 VLAELRITLN RREQFALEKV LVDELLGFGP LEELLSDPDI SDIMVNGPYQ TYVERKGQLV 181 IAPIQFRDEQ HLFQIAQRIC NQVGRRVDQT TPLADARLKD GSRVNVIVPP LSLRGTAISI 241 RKFSAKPITL DMLCQWGAMS QKMCTALKIA GASRFNIVIS GGTGSGKTTM LNALSKMIDP 301 GERVLTIEDA AELRLQQPHW LPLETRPANL EGNGAIHMGD LVKNALRMRP DRIIMGEVRG 361 AECFDLLAAM NTGHDGSMCT LHSNSPRECL GRMENMVLMG DIKIPKEAIS KQIADSVDLI 421 VQIKRLRDGS RRVTNVTEVI GMEGDVIVTQ ELFKFEYLDE DKDGKIIGEY RSMGLRPYTL 481 EKARQYGFDQ PYLEACL //