LOCUS AMU93461.1 538 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 histidine kinase protein. ACCESSION CP013342-473 PROTEIN_ID AMU93461.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_02440" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003040340.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MARGIASPMM ADASIAEQEE APLVWSARWS LTTRILAVNI LAIALLAGGF FYLDTYRTRL 61 VDTRISEMQD QLGLLDSALE AARPDQRARL IGEFTRTTES RLRFYAADGR KLSDSFDHGP 121 PTYTLRDPDL QAWQRDAARA MDRGIDWIVG APSYPEYTEP AHDTLAAWPE AEATLRSGEA 181 QARFRYAPER TPLLSATRVV DLETPEVMLM TLNARDITRT VRAERFRLAI VIAMVVIASV 241 LLSLFLARTI VRPLRRLARA AVRVRLGRAR EVVVPRLPSR RDEIGTLARA LSDMTQALRE 301 RIDAGEHFAA DVTHELKNPI ASVRSAIEGL GRVTSDAQRT QLLAIADEDV RRLDRLVTDI 361 SDASRIDAQL SRASFEPVDV GLMIESMLAA RCARNSQSED RPRIAFARPR KGTTAVMGDG 421 HRIERAIDNV IDNAISFSPA GGLVCIAATR LGDEVHVRVD DDGPGIEPSQ REAIFRRFHS 481 ERPSGEAFGK HSGLGLAIAR TIIEGHGGTI SARDRDDGRP GASLLITLPA REGSDPTG //