LOCUS AMU93450.1 965 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 peptidase M16 protein. ACCESSION CP013342-462 PROTEIN_ID AMU93450.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_02385" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003040308.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MKRTIFWRIS TALSPLALIA VSISPVLAKP AAAPAAAQVV PVNPQTAAAK AWNFAASDVP 61 VDSNIVFGVL PNGMKYALLK NSTPKDSVVL RMRFDVGSFA EAEDQRGLAH FIEHMAFNGS 121 THVPEGEMIK LLERKGLAFG ADTNASTGFD QTVYQLDLPN ASDDLIDTGL MLMRETASEL 181 TIDPAAVDRE RGVILSERRA RDTYQLRNIV DQLGFQMKGM TVANRMPIGT EEVIRTAPAS 241 RLRDLYDRYY RPERATLVMV GDFDPAAVEA KIKARFADWQ GRGPAGADPD IGTLDFKRPV 301 AAESFVDPAI QDSVTIASFK PWVQQADTKA KRARKLAEDI GEAILSRRLA KIALDENSPI 361 LAGYFSEADG WKVFDQVTVG AIAKEGAWTE ALGLIERELR RAVQFGFTQA EVNEQIANRR 421 TALKNAVAGV TTRRSDALAD VLVDASDGDY VVVRPETSQA LFDAVAPQLS ADAVSAAFRN 481 RMEGFSPPLA RVTAKTPVEG GDKAILAALD TARAVAVTPP AQARSAAFAY DNFGTPGTVV 541 SDDRIDDLGI RRIRFANNVM LNIKKTDFQK DKVYLSVRVD GGTLLATRDD PTKVALAGSI 601 SLGGLEAHSL DDLRTIFAGK TVSPSFGVDT DAFGGKAVTS PDDFAAQAEL MAAYLTHPGY 661 RADGLALIRR YLPQQYAAND ATPGAVMARD SAGILANGDP REETPPLATM MALDWSKLKA 721 AVADSFDHGA IEIGVVGDID EQAAIDAIAA TFGALPERRA AFDPHSDARK RDYPVDHSER 781 TLIHKGPADQ AELRVYWPAR DDSDLTEAMR LNLLSRVMQL MLTDELREKL GETYSPSAGA 841 SLSDEYPGYG WLVAASNVDY KDLATTRAAI FAIAKELRDK PVDADTLDRA RKPLVEAMTK 901 ARRENAYWLA YVAEATSRAD RLDRSRNGIA AVEAATPAEL EALAKRYLVD DKALVIRAIS 961 DKAGK //