LOCUS AMU93406.1 980 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 peptidase M16 protein. ACCESSION CP013342-418 PROTEIN_ID AMU93406.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_02165" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003040179.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSVSPPSTAR RSLSLFLLPA CASALALLIA PLATAQSTPA PAAASTLAGQ ASDWLYEGSD 61 IPRDEGWRFG VLPNGLRYAV RNNGVPPGQV SIRVRMDVGS MFESNSERGF AHLLEHLTFR 121 GSLHIPDGET KRIWQRFGVT FGSDSNAQTT PTQTVYQLDL PSVTPTTLDE SMKLLSGMVR 181 EPRITDAAVT AERGVVLSEL REQDGPQKRI ADATSGHLFA GQLLGERSPI GTTAALGAAS 241 AKSVQAFHDR WYRPDRAVVV MVGDGDPAQF AALIGKYFGD WKEPGPNPAQ PDFGKPDPSQ 301 PVAKEIVEAN QPLALTLAMI RPWKKRIDTV ENTRRLYLEY LAQALVNRRL ENRARSGGSY 361 LVATVSQDYV SRSADVTSAE IVPLGDWKAA LADVRGVIAD AVQTPPSQAD IDREANEIEA 421 FLRKELENAP NEPGSRLADD MVRAVDIGET VTSPKGQVDM FAAIRASATP QVMLDISRAI 481 FAAPVTRLVL TTPTPIEGGD KALLAALAAP VTARDDRVAA AKVDFSQLPA LGHPGTIESE 541 TPLPGLHVQR LEFANGVTAL VADNKVEPGK VRVNVRFGSG NRSVAGNAPN LLWTGDYALM 601 ASGVGPWGQN ELDQATNGRQ IQMGFDIDDD AFEMTAESNP ADLRDQLRLM ATKLAAPRWD 661 ASPIERLRVG LLTGFDLNDA TPNAVLDRNL RGWLAGGDTR WAPPSRAAIE GLTPAAFRAF 721 WEPRLKSGPI EVQIFGDLES VDYKQLLAES FGALAPRQPL APAGGQSVAF AQHNAKPFVA 781 YHTGDKGQAA AMIAWPTSGG IDNMRDARAM DVLAAIFNDR LFDRLRAEQG ASYGPVVDSH 841 WPTGFEKSGG YLLVGSLLAP KDVNRLYSIA DDIAADLVAR PVSADELARN AGPIREQVAR 901 ATTGNLYWMY LLEGATRDPR YIKAAMAIED DVTNISAADI QRLARQYLVP GRKWSLAVLP 961 KGMTLAQAAA LDGGAIGGGK //