LOCUS AMU93125.1 688 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis terrae subsp. terrae NBRC 15098 hypothetical protein protein. ACCESSION CP013342-132 PROTEIN_ID AMU93125.1 SOURCE Sphingopyxis terrae subsp. terrae NBRC 15098 ORGANISM Sphingopyxis terrae subsp. terrae NBRC 15098 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 3979087) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284143 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3979087) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 2.8 Genome Coverage :: 110x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:33:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 3,797 CDS :: 3,699 Pseudo Genes :: 49 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 45 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis terrae subsp. terrae NBRC 15098" /mol_type="genomic DNA" /strain="203-1" /sub_species="terrae" /culture_collection="NBRC:15098" /type_material="type strain of Sphingomonas terrae" /db_xref="taxon:1219058" /geo_loc_name="Japan: Kyoto" /collection_date="1974" protein /locus_tag="AOA14_00700" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_011951326.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MPTAASVIDI TSLTDRGGAT GSGELLADQP SVRFNNLNSS VTSEISIRAS STARATNGDP 61 SVGLYRNGAY IAGGPVGGRN FTRLDLLDIG RVEVLRGTQG ALYGRNAVGG AINIISAEPE 121 FDLSGWASAR YGFENNSFQT QGAINVPLAD GLAIRISGDL VEQDKGFFYN PDNDVYFDQQ 181 KGHGLRGQIR LKRGPVDAII TAETQRLTTP TIHYQISIPA GTPGFPGGYT QDRFRYPWNT 241 APRASQDVDG LQALVRVDLG GADLTSTTSF RKRTSEYDLD NDAISPAELA RARAAGQIGA 301 LTPLDASTAS YVVDTTDNFS QDIHVSGASD RFTWLVGAEM LLLDSDFSVA TTRTPTLANP 361 SPGNIAPARL HFESYAAYGS LGFDITDSLN LTGELRYTRD SRSISARLYD LGTGLPTGGP 421 SRIIDDSINA DNLSYNATLS YKLTSNILAY GKVGSSYRAG GFNTRLSDPR APSPVQVLFG 481 NENSTSYEVG IKGSPIRRGY FAIAGYYTEL EDLIAQVDDG CALTNPACPI AAVAYLTNAG 541 DAKSWGIEAE YSQGFDLGEG NGRLALSGSR QEGKVKSGRY DGLDLAQVPD WLASANLNLR 601 YPVTKDVALT SNVLISGQWG GKQELTATSV DLDDYVLVNL RVGVDFGKIS VSAFANNVFD 661 KVYFVAQAPT INRYSQPRVV GVEGRISF //