LOCUS       AMU93002.1              1412 aa    PRT              BCT 21-JUN-2016
DEFINITION  Sphingopyxis terrae subsp. terrae NBRC 15098 methylase protein.
ACCESSION   CP013342-8
PROTEIN_ID  AMU93002.1
SOURCE      Sphingopyxis terrae subsp. terrae NBRC 15098
  ORGANISM  Sphingopyxis terrae subsp. terrae NBRC 15098
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 3979087)
  AUTHORS   Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K.,
            Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC
            111660), a Polyethylene Glycol Degrader
  JOURNAL   Genome Announc 4 (3) (2016)
   PUBMED   27284143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979087)
  AUTHORS   Yoshiyuki,O.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2015) Department of Life Sciences, Tohoku
            University, Katahira 2-1-1, Sendai 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Annotation was conducted using PGAP and MiGAP, and PGAP annotation
            was curated by referencing to the MiGAP annotation with the aid of
            annotation support tool of GenomeMatcher software.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: newbler v. 2.8
            Genome Coverage       :: 110x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/30/2015 14:33:14
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 3.0
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 3,797
            CDS                          :: 3,699
            Pseudo Genes                 :: 49
            rRNAs                        :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs               :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                        :: 45
            ncRNAs                       :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis terrae subsp. terrae NBRC 15098"
                     /mol_type="genomic DNA"
                     /strain="203-1"
                     /sub_species="terrae"
                     /culture_collection="NBRC:15098"
                     /type_material="type strain of Sphingomonas terrae"
                     /db_xref="taxon:1219058"
                     /geo_loc_name="Japan: Kyoto"
                     /collection_date="1974"
     protein         /locus_tag="AOA14_00050"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_013832720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSHANTAFAF SDPAEPQVLA AARALAARLA ADQAISRLTV NATMADHFGG SDAEGRWSVR
       61 DAHAALELAQ VLFLAQATEF SSAMSSSFAD EAFTRLEGLV PTQSNRSDEQ IEWQQFATPP
      121 RLAWMAAKAC AISVNELVLE PSAGTGMLGI WAAKAAARLA LNEISPLRRE CLGAVFPEAT
      181 VTGFDAELID ELLTPDVGPS VVLMNPPYSH GIERGHDSRT GDRHLRSAWK RLLPGGRLVA
      241 VMPEWFELPK FLAGIAGPVS LRLNATIERG FVKQGTSIST RLVVLDKAED GTSPIIAQPA
      301 NFAELHLLID MLPDRVSLPA EPSIGIKPAL PLRLVANRTK PVPHKVHPTV AAPSILPLDF
      361 APLEAPAPIE SQVGHYLPYR PSRISIADAV PHPTPLVESV AMGSITAPVP EVVPQLPSNL
      421 IAGGVLSAAQ AETLIYAASA HARDLPGRFE PDDKGCALKA SAEGHAYRMG YFLGDGTGAG
      481 KGRQVASVIL DRWVRGERRH IWISKNEALL EDARRDWSAL GGLPIDVQPL GQWKLGVPIR
      541 MREGILFVTY PTLRSGRSDA TRLDQILEWA GEDFDGLIVF DEAHAMANAA GGEGSRGKVK
      601 GSEQGIAGVR IQNLLPRARV LYASATGASD VNNLAYATRL GLWGPETAFA NREAFVADIR
      661 DGGIAAMELV ARDLKSLGLY AARALSFAGV EYEILEHCLT PDQVADYDAY ADAWAIIHAN
      721 LREALEATRI VDTDSGETLN SGAKSAALSV FEGTKQRFFA QLLLSMKLPS LLPAIDTALA
      781 DGNAVVVQLV STAEAMLNRR LADLSDADRE ALEIDLSPRE YVIDYLTKSF PVRLMSVFTD
      841 ENGNARSEPM SDENGAPVLC RSALAARDRM IEQLCALPPI ATALDAIIER FGVDQVAEVT
      901 GRTRRLIVGR DGRQVLQSRS PRANVAETRD FMDGTKRILV FSDAGGTGRS YHADLAAKNQ
      961 MRRVHFLLEP GWRADAAIQG LGRTNRTNQA SAPLFRPVTT DVRGERRFIS TIARRLDSLG
     1021 ALTRGQRQTG GQNLFDPADN LESTYAKEAL HRWFGLLFAG KLEAVTLSRF EELSGLRVEG
     1081 PDGGMVDDLP TIQRWLNRIL ALPIALQNGI FDEFLGLVEA RIDAARQAGT LDIGVETIAV
     1141 EHYEVLTDTL LRTDALSGAT THLLELEIAR ALKPLRLKRL EDLYGFSGTR QQLLRNTRSG
     1201 RIGLLVPARS LLTDEGMRVA RFELVRPLKH GHITADQLAE SNWETVDPTE FRRLWQAEVD
     1261 DAASNHKRER LHLATGLLLP VWDKLPSDYV RVSRISARDG RSLLGREVPL HCVPELCQAL
     1321 GLEDEHAFSA EQIVDAVLGT GRAMQIKSRE ALTLKRSLVN GAQRLELAGW SASRLDWYKA
     1381 HGCFTEIIRY QTRLFVPTTN AVPVLARLAG QI
//