LOCUS AEG53703.1 885 aa PRT BCT 08-JUN-2015 DEFINITION Sinorhizobium meliloti AK83 MscS Mechanosensitive ion channel protein. ACCESSION CP002781-1928 PROTEIN_ID AEG53703.1 SOURCE Sinorhizobium meliloti AK83 (Ensifer meliloti AK83) ORGANISM Sinorhizobium meliloti AK83 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. REFERENCE 1 (bases 1 to 3820344) AUTHORS Galardini,M., Pini,F., Bazzicalupo,M., Biondi,E.G. and Mengoni,A. TITLE Replicon-dependent bacterial genome evolution: the case of Sinorhizobium meliloti JOURNAL Genome Biol Evol 5 (3), 542-558 (2013) PUBMED 23431003 REFERENCE 2 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of chromosome1 of Sinorhizobium meliloti AK83 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (16-MAY-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4086303 Source DNA and organism available from Emanuele G. Biondi (emanuele.biondi@unifi.it) Contacts: Emanuele G. Biondi (emanuele.biondi@unifi.it) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sinorhizobium meliloti AK83 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Host, Plant root, Root nodule, Soil num_replicons :: 5 ref_biomaterial :: Missing biotic_relationship :: Symbiotic trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05780 Current Finishing Status :: Finished Funding Program :: DOE-CSP 2009 Source of Isolate :: Biondi, Emanuele (Universita di Firenze) Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 25 - 30C Gram Staining :: Gram- Symbiotic Relationship :: Mutualistic Diseases :: None Phenotypes :: Nitrogen cycle, Streptomycin resistant, Symbiotic ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Sinorhizobium meliloti AK83" /mol_type="genomic DNA" /strain="AK83" /db_xref="taxon:693982" /chromosome="1" /collected_by="Emmanuele Biondi" protein /locus_tag="Sinme_1979" /inference="protein motif:PFAM:PF00924" /note="PFAM: Mechanosensitive ion channel MscS; KEGG: smd:Smed_1800 MscS mechanosensitive ion channel" /transl_table=11 /db_xref="InterPro:IPR006685" BEGIN 1 MHLFAVMHVQ TGNWQSSERF CAAQGLSKGR KLHLLEKLRA LSIALSFGAL TLAAGGSAVA 61 QEPEPSVEQT RPAQQAAPAQ PLQPAQSVQP APQAEPAQPA TQTGTGQAPD AASPVLQQAE 121 DQLAQADREL KRLIERTNAV EDDDAMLAEL RVQVDELSKQ IIAASVPTRP RLDEIKARLT 181 ELGDPPGEGQ PPEDAVITDE RKRLLAERGA INALTGRAEN LSVEARKLAN RITATRRAIF 241 SNTLLRHTDV SAAMLSEAVT ATMHEAMALS RSIGGWLTFA WNYKRVPLLS AIFLSLCAAL 301 LFLVGGYRLF SPVLMRHEED DEPTYFRQLS LAFWSTLIPT LALAAFAMSS YFFLSSFNVL 361 RPDIAPIVAI TLAMGVVLFF IARLAGAVLS PNRSSWRLVR VSDRGAKMLM VPIFAMALVN 421 GLDYLLGSIS ESLGSPVVLT IAKSFVASII IGLILMSMAW IRPVLRADEP YDAPGRPWPR 481 VISLSFLLLG AALIATALSG YVGLARFIAT QITVTSAILV TVYIGLLTGK SVSKQGAFAE 541 TVAGRYLERR FHLEPVALDQ FGLFAGLGIY VLVLSFFIPL ILMQWGFKTA DIESWAYQVL 601 TEIRIGTITI SLVGILAGVL LFALGFLVTR WVQRWIDGNV MARSRVDAGV RNSIRTGIGY 661 MGVGIAGLIG LSAAGIDLSS LALVAGALSL GVGFGLQNIV SNFVSGLILL VERPFKVGDW 721 IVSGTTEGFV RRISVRATEI ETFQHQSIMM PNSLLINASV GNWTHRNKLG RSEIAVTVTY 781 ASDPRRVIEL LYEIAAAHPM ILKNPAPNVG FTAFEDERMT FELRIYVADV LTAGGVRNDL 841 RVSIYERFRD EGIGAPFPMK IEDVTPEEEA GSAGPEPSVM EKEKA //