LOCUS AEG53438.1 887 aa PRT BCT 08-JUN-2015 DEFINITION Sinorhizobium meliloti AK83 alanyl-tRNA synthetase protein. ACCESSION CP002781-1663 PROTEIN_ID AEG53438.1 SOURCE Sinorhizobium meliloti AK83 (Ensifer meliloti AK83) ORGANISM Sinorhizobium meliloti AK83 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. REFERENCE 1 (bases 1 to 3820344) AUTHORS Galardini,M., Pini,F., Bazzicalupo,M., Biondi,E.G. and Mengoni,A. TITLE Replicon-dependent bacterial genome evolution: the case of Sinorhizobium meliloti JOURNAL Genome Biol Evol 5 (3), 542-558 (2013) PUBMED 23431003 REFERENCE 2 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of chromosome1 of Sinorhizobium meliloti AK83 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (16-MAY-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4086303 Source DNA and organism available from Emanuele G. Biondi (emanuele.biondi@unifi.it) Contacts: Emanuele G. Biondi (emanuele.biondi@unifi.it) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sinorhizobium meliloti AK83 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Host, Plant root, Root nodule, Soil num_replicons :: 5 ref_biomaterial :: Missing biotic_relationship :: Symbiotic trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05780 Current Finishing Status :: Finished Funding Program :: DOE-CSP 2009 Source of Isolate :: Biondi, Emanuele (Universita di Firenze) Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 25 - 30C Gram Staining :: Gram- Symbiotic Relationship :: Mutualistic Diseases :: None Phenotypes :: Nitrogen cycle, Streptomycin resistant, Symbiotic ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Sinorhizobium meliloti AK83" /mol_type="genomic DNA" /strain="AK83" /db_xref="taxon:693982" /chromosome="1" /collected_by="Emmanuele Biondi" protein /locus_tag="Sinme_1703" /inference="protein motif:TFAM:TIGR00344" /note="TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1; KEGG: smd:Smed_1521 alanyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase, SAD" /transl_table=11 /db_xref="GO:0000166" /db_xref="InterPro:IPR002318" /db_xref="InterPro:IPR003156" /db_xref="InterPro:IPR012947" /db_xref="InterPro:IPR018164" BEGIN 1 MSGVNEIRSM FLDYFRKNGH EIVSSSPLVP RNDPTLMFTN AGMVQFKNVF TGLEQRPYST 61 AATAQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKERAIELA WNLITKEYGL 121 DAKRLLVTVY HTDDEAFGLW KKIAGLSDDR IIRIATSDNF WAMGDTGPCG PCSEIFYDHG 181 DHIWGGPPGS AEEDGDRFIE IWNLVFMQYE QITKEERVDL PRPSIDTGMG LERVAAVLQG 241 QHDNYDIDLF RALIAASEEA TGVKAEGDRR ASHRVIADHL RSSAFLIADG VLPSNEGRGY 301 VLRRIMRRAM RHAQLLGARD PLMWKLLPAL VGQMGRAYPE LVRAEALISE TLKLEETRFR 361 KTLERGLNLL AEASADLSEG DQFNGETAFK LYDTYGFPLD LTQDALRAKG IGVDTDAFTA 421 AMQRQKAEAR ANWAGSGEAA TETIWFELRD KHGATDFLGY DTESAEGVIL AIVKDGAVVE 481 SAAKGENVQL VLNQTPFYGE SGGQVGDTGV ITTETGKLTV TDTQKRGEGL FVHYCTVEEG 541 SVKTGEAAAL TVDHARRARL RANHSATHLL HEALREVLGT HVAQKGSLVA PERLRFDVSH 601 PKPMTAEELK IVEEMANEII VQNTPVVTRL MSVDDAIAEG AMALFGEKYG DEVRVVSMGQ 661 GLRGSKAGKP YSVELCGGTH VSATGDIGLV RVVSESAVGA GVRRVEALTG EAARAYLGEQ 721 DERVKTLAAA LKVQPADVLG RVEALLDERR KLERELTEAK KKLALAGDGQ NGSGDAARDI 781 GGVRFLGRVV SGVEPKDLKS LADDGKKSLG SGVVAFVGVS GDGKASAVVA VTDDLTSKVS 841 AVDLVRVASA ALGGKGGGGR PDMAQAGGPD GGRAAEAIEA VAGALAG //