LOCUS AEG53215.1 1163 aa PRT BCT 08-JUN-2015 DEFINITION Sinorhizobium meliloti AK83 carbamoyl-phosphate synthase, large subunit protein. ACCESSION CP002781-1440 PROTEIN_ID AEG53215.1 SOURCE Sinorhizobium meliloti AK83 (Ensifer meliloti AK83) ORGANISM Sinorhizobium meliloti AK83 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. REFERENCE 1 (bases 1 to 3820344) AUTHORS Galardini,M., Pini,F., Bazzicalupo,M., Biondi,E.G. and Mengoni,A. TITLE Replicon-dependent bacterial genome evolution: the case of Sinorhizobium meliloti JOURNAL Genome Biol Evol 5 (3), 542-558 (2013) PUBMED 23431003 REFERENCE 2 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of chromosome1 of Sinorhizobium meliloti AK83 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (16-MAY-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4086303 Source DNA and organism available from Emanuele G. Biondi (emanuele.biondi@unifi.it) Contacts: Emanuele G. Biondi (emanuele.biondi@unifi.it) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sinorhizobium meliloti AK83 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Host, Plant root, Root nodule, Soil num_replicons :: 5 ref_biomaterial :: Missing biotic_relationship :: Symbiotic trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05780 Current Finishing Status :: Finished Funding Program :: DOE-CSP 2009 Source of Isolate :: Biondi, Emanuele (Universita di Firenze) Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 25 - 30C Gram Staining :: Gram- Symbiotic Relationship :: Mutualistic Diseases :: None Phenotypes :: Nitrogen cycle, Streptomycin resistant, Symbiotic ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Sinorhizobium meliloti AK83" /mol_type="genomic DNA" /strain="AK83" /db_xref="taxon:693982" /chromosome="1" /collected_by="Emmanuele Biondi" protein /locus_tag="Sinme_1471" /EC_number="6.3.4.16" /inference="protein motif:TFAM:TIGR01369" /note="SMART: Methylglyoxal synthase-like domain; TIGRFAM: Carbamoyl-phosphate synthase, large subunit; KEGG: smd:Smed_1257 carbamoyl phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthetase, large subunit, oligomerisation; Methylglyoxal synthase-like domain; Carbamoyl-phosphate synthase, large subunit, N-terminal" /transl_table=11 /db_xref="GO:0004086" /db_xref="InterPro:IPR005479" /db_xref="InterPro:IPR005480" /db_xref="InterPro:IPR005481" /db_xref="InterPro:IPR006275" /db_xref="InterPro:IPR011607" BEGIN 1 MPKRQDIKSI LIIGAGPIVI GQACEFDYSG TQACKALKEE GYRVILVNSN PATIMTDPGL 61 ADATYVEPIT PEVVAKIIAK ERPDALLPTM GGQTALNTAL SLRRMGVLDR YNVEMIGAKP 121 EAIDKAEDRA LFREAMAHIG LETPKSRLAN ATDIKDHDRK SHEAERSALK AKLSGDELDK 181 ALDELENQWN LGEGDRKQRY VNHAMAIAAQ ALDDVGLPAI IRPSFTLGGT GGGIAYNRSE 241 FFEIVGSGLD ASPTTEVLIE ESVLGWKEYE MEVVRDKADN CIIICSIENI DPMGVHTGDS 301 ITVAPALTLT DKEYQIMRNA SIAVLREIGV ETGGSNVQFA VNPENGRLVV IEMNPRVSRS 361 SALASKATGF PIAKIAAKLA VGYTLDELEN DITGGATPAS FEPSIDYVVT KIPRFAFEKF 421 PGAEPTLTTA MKSVGEVMAI GRTFAESLQK ALRGLETGLT GLDEIEVPDF DDNGDGRNAI 481 RAALGTPTPD RLRMVAQALR LGMSEAEVHE ACKIDPWFIA QFKAIVDMEA RIREHGLPAD 541 AENLRMLKAM GFSDARLATL TGKRPKEVAE LRNALNVRPV YKRIDTCAAE FASPTAYMYS 601 TYETPFVGAA RSEAQVSDRK KVVILGGGPN RIGQGIEFDY CCCHAAFALK DAGYEAIMIN 661 CNPETVSTDY DTSDRLYFEP LTAEDVIEIM RAEQENGTLH GVIVQFGGQT PLKLAEALEK 721 NGIPILGTAP DAIDLAEDRD RFQKLLMKLD LNQPNNGIAY SVEQARLVAG EIGFPLVVRP 781 SYVLGGRAMQ IIHSESMLQS YLLDTVPGLV PEDIKQRYPN DKTGQINTLL GKNPLLFDSY 841 LTNAIEVDVD CLCDGKDVFV SGIMEHIEEA GIHSGDSACS LPVHSLGKDM VDELERQTGA 901 LARALNVGGL MNVQFAIKDG TIYVLEVNPR ASRTVPFVAK TIGAPIAKIA ARVMAGEMLD 961 EAIAAYGKKP DPRNLKHIAV KEAVFPFARF PGVDTLLGPE MRSTGEVIGL DTDYALAFAK 1021 SQLGAGVDLP RDGTVFVSVR DEDKERVLPA IRILSDIGFK VMATGGTARF LGEQGIVATK 1081 INKVLEGRPH VEDAIRNRQV QLVINTTDGN KAISDSKSLR RATLMQKVPY YTTMAGAEAA 1141 ALAIKALKAG NLEVRPLQSY FEA //