LOCUS AEG52171.1 1862 aa PRT BCT 08-JUN-2015 DEFINITION Sinorhizobium meliloti AK83 adhesin HecA family protein. ACCESSION CP002781-396 PROTEIN_ID AEG52171.1 SOURCE Sinorhizobium meliloti AK83 (Ensifer meliloti AK83) ORGANISM Sinorhizobium meliloti AK83 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. REFERENCE 1 (bases 1 to 3820344) AUTHORS Galardini,M., Pini,F., Bazzicalupo,M., Biondi,E.G. and Mengoni,A. TITLE Replicon-dependent bacterial genome evolution: the case of Sinorhizobium meliloti JOURNAL Genome Biol Evol 5 (3), 542-558 (2013) PUBMED 23431003 REFERENCE 2 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of chromosome1 of Sinorhizobium meliloti AK83 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (16-MAY-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4086303 Source DNA and organism available from Emanuele G. Biondi (emanuele.biondi@unifi.it) Contacts: Emanuele G. Biondi (emanuele.biondi@unifi.it) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sinorhizobium meliloti AK83 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Host, Plant root, Root nodule, Soil num_replicons :: 5 ref_biomaterial :: Missing biotic_relationship :: Symbiotic trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05780 Current Finishing Status :: Finished Funding Program :: DOE-CSP 2009 Source of Isolate :: Biondi, Emanuele (Universita di Firenze) Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 25 - 30C Gram Staining :: Gram- Symbiotic Relationship :: Mutualistic Diseases :: None Phenotypes :: Nitrogen cycle, Streptomycin resistant, Symbiotic ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Sinorhizobium meliloti AK83" /mol_type="genomic DNA" /strain="AK83" /db_xref="taxon:693982" /chromosome="1" /collected_by="Emmanuele Biondi" protein /locus_tag="Sinme_0408" /inference="protein motif:TFAM:TIGR01731" /note="KEGG: xtr:100498028 hypothetical protein LOC100498028; TIGRFAM: Adhesin HecA 20-residue repeat x2; PFAM: Domain of unknown function DUF637, haemagglutinin/haemolysin putative" /transl_table=11 /db_xref="InterPro:IPR006915" /db_xref="InterPro:IPR010069" BEGIN 1 MPSLSTASTR PIPSPAAPGI CRSSVATAGT IVADRTLEIV ADSGGIGNSG TLIGGSARFE 61 TTAAFRNDGD TLTIAAAAPF INAAALVSGR DLAIYNDQIL NNGGVIWANG SITLAANAAL 121 DPADVVQNTD GHIEALQGDL TIRANEVYNV GTAPTIGSSQ IIKWLEKGSA GTTEPAEEIL 181 KLIDPAYLDA DGNIKPSHAG AYAALWADLV SGGSLLSATS RSIVKPSVTT PSGTALAAAF 241 AGIWSDMLAR ANAAGTPDPA AAIKELVSDT AFASNGDILP QNAAAYAALW DTLASGGTSV 301 TDDVKAILKP TSLEIEGTGT DPATGETATV YSNRLVAAAT SPWSAMTAGS GAAYDIVKIL 361 YQDRFQDDGV LAELVAGGSI DIKAGKVENI YGNISAAENI VITADDVKNQ ALGASQFLVE 421 VHKRPDCFTC HEGKVEFYDT FGGRIEANGT VAISGNLENI TLPSSELSTK DVLDKLNAYI 481 AERQAAGDPD MAGVPPASDK NFELTETRTD DYTAPVAGNG SEVRKVEGTD LGSETKVDTG 541 PPAKFDPLSP IAVNRYGPVV VDPLAPVAVD RPAPASVALP GTPTVIPVDT AVLSEKLLPV 601 VPLRPSLSPT ASVDALLVAG LTTLAETDPE FTQYANFVTS DYLMSEGRLA YRDDLVNNGR 661 ETILAALKRA GERVPVPAFD YLDKPVQVPA PDGSGSRTVY PKAVPLSLDA TGALIQGRDV 721 AIASGSLTSS GTIAGSRSLT VSAGTVSVDS GRLIAESGAL TLSALDAASF ENATISGGSV 781 ALVTGGELLA AGTSIVSAGD LSIYGNAGVT LTGLERSFAG TWANGTFETV DQQLSTLQSG 841 GDLAIVSGGA LTLAGVTGDA AGALSLAAAG DLVLSAVEST TAFQRSGRRS SLDISTVASS 901 ATKLNAGGDL SALAGGSAVL VGTALDSGGS IRLAAKDEVV LAAAQDIYSY DAKTQKKSLF 961 KKKSTSVSKA RVTNEGVSVA AAGDVDVVAE TGDFVTAGSR FVSAGGDIGL SATEGDIYAG 1021 AYTDIFQESR TTKKSYFFGL FGSTTNSSTE SRFSTGTDAL AALDLTLVSG ADTTLVGAHL 1081 AAGGNLSVDT GGDFKVEAAI DSERKAFFSN NLGLVTMTTI TERSFRETAK LSSFEAGGAV 1141 DFSIGGQASL SLYHQAGVDP ANPGDLYPEE LLAIAGLAFI EAGLANEYFY DKQVALSPAF 1201 KALVAVAVAN FVAPAIVGTV LPGLSGWAVA AAEAFTSSFI VESLDGIVSG NYDIGEILKG 1261 AAFSGATAGL KDAVNLSALG IDTEGLLNES LLGGFGNGQL TLGGILDGAL DGAIGSGLTS 1321 LVYGTDFGSG FSHALLSTVV NLALADVQGG IGDLGLGEGT LPSALLHGLA GCAAAEAQGG 1381 NCAAGAAGAV AQSFFAGSLK RTTLSDQEQR DRAELIGAVA GYLLSGGDAD NVNLAAAIAV 1441 SALTNNRQLH RTEVEWINEN AGAFISWMCR MKNVCDLTRE QALGILAAET LDGVSDAFGV 1501 YGGPGRRANY KDEARAFIAQ SYVGPIYVDG QTMFGQLDSG SSEYRNTLLN AETALSNLAL 1561 YDYATAQSAW PQDYTAAMSF LHEALNDFAD VPTSIEAQAF VAALSSSPDR TRSIFAAYGA 1621 SNIRAAEPTI AAAYGIKKLL AALPSESRSA AAIGFAEGTT GRTGLTPEEV ENAVLNGTWG 1681 PVADVALEEA LFGDLLTRGM TVVALSSGRR VLQDPDGKQY DTVAEARQAV EAPDTGPRLT 1741 IRGHYKHHKA MTDDLKAQLE SQGYRVSKEE LSFGSSCGTG RCRPDIVYQA PDGKWGIIEV 1801 KTGDASLTFR QEEIYPQIDS GDAIPRGKVA NTFGLKPGIP LKNQGYPNGI PIEIKTFPGA 1861 EQ //